Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03606 ATGTCCACCTTTCTAAAAAGTTCTCTTTCACAAGAAAGCTTCTATTCATCATTCCCTATGGTTTTCTTCACTATCTTCCCACTATTTCTTATTTCTCTTTTCTTCATCATCAAACATTGGTATTTCGACAATTCTTCTGTCACACGAGAAAACTCACCACCTTCACCTCCAAGATTGCCTCTACTTGGTAATCTCCATCAACTTGGCTTATTGCCACACTGGTCACTCCAAAATTTATCACACAAATATGGCCCTTTAATGCTTCTTTATTTTGGTAAGGTTCCAGTACTTGTGGTTTCCTCTGCTGATGCTGCGAGAAAAGTAATGAAAACTCATGACTTGGTTTTCTCTGATAGGCCACATAGTAAAATGCTTGATATCCTTTTATATGGTTCCAAAGATGTGGCAAGTTGTGCATATGGTGAGTATTGGAGACAAATAAAGAGTCTCAGTGTGTTACACCTTCTGAGTAACAAAAGGGTTCGATCTTATCACCGTGTAAGAGAGGAAGAAACTTTGAGAATGATGGAATATATTAAGGAGTGTTGTTCTTCTGCATCGCCGTTGAATTTAACTGAGTTGTGTTCTACAATTACTAATGATATAGTCTGTAGGGTGGCTTTAGGAAGAAGATACCGTGAAGGAAAAGGGAACAAATTTCAGGAAGTTTTGTCGGAGTTTGGGGAGTTATTGGGCACTGTATGTATAGGAGACTATATACCTTGGCTTGATTGGTTGGCGAAAGTTAATGGTATTTATAGAAGGGCAGAAAAATGTGCCAAATATTTGGATGAGTTTATAGAACAAGTTATTGAGGAGCACATTAGTCGTTGGTCTGATGGAGATGTTAGTGTCGATAGTGAGGATCAGAATGATTTTGTGGATGTTTTGCTTTCTATTCAAAAGACTAATGCTATTGGCTTCCCAATTGAGAGAACTTCAATAAAAGCTTTAATACTAGACATGTTTGCTGCAGGAAGAAGGGGTTGTCCTGGAGTATTGTTTGCTATTTCTGTGAATGAATTGGTGCTAGCAAACCTTGTTTACAAATTTGATTGGAAATTGCCTGATGGAATAGCAGGGAAGGATTTGGACATGTCTGAGACTGGTGGCCTTACTTGTCATAGAAAAGACCCTCTACTTGCTGTAGCTACAAAATATGACAGAAATGAATAA 1176 0.3801 MSTFLKSSLSQESFYSSFPMVFFTIFPLFLISLFFIIKHWYFDNSSVTRENSPPSPPRLPLLGNLHQLGLLPHWSLQNLSHKYGPLMLLYFGKVPVLVVSSADAARKVMKTHDLVFSDRPHSKMLDILLYGSKDVASCAYGEYWRQIKSLSVLHLLSNKRVRSYHRVREEETLRMMEYIKECCSSASPLNLTELCSTITNDIVCRVALGRRYREGKGNKFQEVLSEFGELLGTVCIGDYIPWLDWLAKVNGIYRRAEKCAKYLDEFIEQVIEEHISRWSDGDVSVDSEDQNDFVDVLLSIQKTNAIGFPIERTSIKALILDMFAAGRRGCPGVLFAISVNELVLANLVYKFDWKLPDGIAGKDLDMSETGGLTCHRKDPLLAVATKYDRNE 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03606 391 SUPERFAMILY Cytochrome P450 49 385 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03606 391 Pfam Cytochrome P450 53 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03606 391 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03606 391 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03606 391 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03606 391 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03606 391 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 328 387 - -
Trre8g03606 391 Gene3D Cytochrome P450 325 389 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03606 391 Gene3D Cytochrome P450 41 324 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03606 Trre-Chr8 40618784 40621355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03606 323 385 Cytochrome P450 AT3G48300 44.444 4.92e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03606 - - gmx:100819183 391.734