Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03584 ATGGAGCTAAACTTTGGTAATTCTTTAGACACATTTTCTTCTGATCAAGATGGTTTGTCCCTTAAGCCATTAAGGTGTCCTGCACCTTTTCTTTTGAAGACCTATGATTTGTTGGAAGAAGGCAGTGAAGAAAAAGATGGCATTAAAATAGTGTCATGGAATGAAGAAGGAAATGGTTTTGTGGTGTGGTCTCCAGCTGAATTCTCAGAGCTCATCTTGCCAAAATATTTCAAGCACAATAACTTCTCTAGCTTTATTCGACAATTGAATACATATGGATTTAAGAAAACATCATCTAAAATATGGGAATTCAAGCATGAGAAATTTCAAAAGGGTTGTAGGCACATGCTTGTTGAAATCAATAGGAAAAAGTGTGAGCCAAGTGTGTTTCCTCAATACCTTAAGTCTTGTTCAGAGGAAAATGCTATGACTAGTTCATCAGTGGAAGAAAATAGCAACAATCATGAAATACTCATGGAGGAGAATAAGAACCTAAAGAAGGAGAGATTAGAGTTGCAAATGCAAATAGCTGAATGCAAGGCACTTGAAATGAAGTTGTTGGATTGTCTCTCTGAATATATGGATACCCGCCAAAATAAAGTTAGGAGACTATGA 615 0.3626 MELNFGNSLDTFSSDQDGLSLKPLRCPAPFLLKTYDLLEEGSEEKDGIKIVSWNEEGNGFVVWSPAEFSELILPKYFKHNNFSSFIRQLNTYGFKKTSSKIWEFKHEKFQKGCRHMLVEINRKKCEPSVFPQYLKSCSEENAMTSSSVEENSNNHEILMEENKNLKKERLELQMQIAECKALEMKLLDCLSEYMDTRQNKVRRL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03584 204 SUPERFAMILY "Winged helix" DNA-binding domain 27 123 IPR036390 -
Trre8g03584 204 Gene3D - 24 125 IPR036388 -
Trre8g03584 204 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 25 182 IPR027725 -
Trre8g03584 204 FunFam Heat stress transcription factor A-6b 23 124 - -
Trre8g03584 204 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Trre8g03584 204 PRINTS Heat shock factor (HSF) domain signature 85 97 IPR000232 GO:0003700|GO:0006355|GO:0043565
Trre8g03584 204 Coils Coil 148 185 - -
Trre8g03584 204 SMART hsfneu3 26 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Trre8g03584 204 Pfam HSF-type DNA-binding 30 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03584 Trre-Chr8 40392924 40395170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03584 26 204 HSF AT4G36990 37.438 1.31e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Trre8g03584 HSF_DNA-bind 6e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03584 K09419 - gmx:100783723 289.271