Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03552 ATGGTTATAAACACTTACACTACAATTTCTAGCTTGCTGGAGGGTGTTGGTGTCCTTGGGATTCAACACGTTGCATCATGCCTTCAACAACAATGTGAAAGAACTGTTGGATGCAATCTCTCTCTGTCATACTCAAAGAAACTATGTTATCAGTCAATTTTTCCACAAGGAACCATTGGAAATCCATGTGGTGGAAACTCTACAATGATTAAGCTTGTGTGCTTAGATGCTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTTCTGTCATATCAAGCAATTCCTTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACTCTCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATTGTACTCGCAGGACTACTATTTTTCACTCTGTTGATTGTAACACGATCTAATGATATCTTTCGGATGGCTCTTATTGCAAACGCATGGTTGAACAATGACAAAGTCAGAAAAGCAATTCACACTGTAGAGAAAAGTGTAGCCAGTAGTTGGGATTTATGCACAAACAAAATTTTCTTCGATCATAACTTCCAGAGGATATTGAGCTCTTATATTCAGATTGCTGAGTTTGAGAAAATTCCCGAAGAGAAGAGACAAAAGCTGAGTGATGGTGATTTTGGTGAAAGTGCAGTCTGCAAGGAGCTATTCCTAATTGGAGTTTAA 726 0.3884 MVINTYTTISSLLEGVGVLGIQHVASCLQQQCERTVGCNLSLSYSKKLCYQSIFPQGTIGNPCGGNSTMIKLVCLDAEGPFKYGIYQWALSVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLAGLLFFTLLIVTRSNDIFRMALIANAWLNNDKVRKAIHTVEKSVASSWDLCTNKIFFDHNFQRILSSYIQIAEFEKIPEEKRQKLSDGDFGESAVCKELFLIGV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03552 241 SUPERFAMILY Voltage-gated potassium channels 16 147 - -
Trre8g03552 241 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 19 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03552 Trre-Chr8 39745270 39747186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03552 18 136 Ion Channels AT5G15410 69.672 4.68e-51 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03552 K05391 - gmx:100798823 217.624