Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03522 ATGGCCGAAATTTCACATTCAGGGTACAAGGATTATGTCGCTGGTTTACTCGCTGGAGTTTCCGCTGTAGTCACTGGTCACCCTTTTGACACCGTTAAGGTGAAGCTGCAGACGCACAATACAAAAGCACATCTAGTTCAATACAGAAATGGATTGCATTGTACTGCTAGGATATTACAGACTGAAGGAATCAAAGGATTTTATAGAGGAGCAACATCATCTTTTGCTGGGATGGCTTTGGAAGGATCTCTCTTTTTTGGCATTTATTCCCAGACAAAACAGTACCTTCAGGGGGGCGTGCAAAGCGGTGCGCCACGACCTCAAGTGATAATACCGTCTGCAGCTTTTAGTGGTGCCATCAACAGTTTTGTGTTAGGTCCAACAGAACTGATAAAGTGTAGGATGCAGATCCAAGGTACCGACTCTTTAGTTCCCGTGTCAAGTAGATACAGTAGTCCCCTTGATTGTGCCCTGAAAACTTTAAAAACTGAAGGGGTGAAAGGAGTATTTCGTGGAAGTGGTACAACATTGCTTAGAGAATCTATAGGGAATGCAACCTTTTTCAGTGTATACGAATATATGCGTTATCGAATGCATTCATATATCAAACCTGCTTCATCTGATTACAGACACCTGATTGAAATTGGAATTGGAGTTGTTACCGGTGGAGTTGGTGGTGTGGCCTTTTGGTTGGTAGTTATGCCCCTTGACGTGGCAAAGACTCTAATTCAGACAAACCCTGATAAAAACTGTCCTAGAAATCCTTTTACGATCTTGAGTTCAATCTACAAGAGGACTGGTTTGAAGGGGTGCTATACAGGTCTCAGCCCCACGGTAAGTCGAGCATTTCCGGCTAATGCTGCAACAATTGTCACTTGGGAGCTAGCAATGAAAATGCTAGGCATTAGGCATGACTGA 918 0.4357 MAEISHSGYKDYVAGLLAGVSAVVTGHPFDTVKVKLQTHNTKAHLVQYRNGLHCTARILQTEGIKGFYRGATSSFAGMALEGSLFFGIYSQTKQYLQGGVQSGAPRPQVIIPSAAFSGAINSFVLGPTELIKCRMQIQGTDSLVPVSSRYSSPLDCALKTLKTEGVKGVFRGSGTTLLRESIGNATFFSVYEYMRYRMHSYIKPASSDYRHLIEIGIGVVTGGVGGVAFWLVVMPLDVAKTLIQTNPDKNCPRNPFTILSSIYKRTGLKGCYTGLSPTVSRAFPANAATIVTWELAMKMLGIRHD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03522 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Trre8g03522 305 SUPERFAMILY Mitochondrial carrier 7 294 IPR023395 -
Trre8g03522 305 FunFam Mitochondrial amino acid carrier 180 304 - -
Trre8g03522 305 Gene3D Mitochondrial carrier domain 111 305 IPR023395 -
Trre8g03522 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Trre8g03522 305 Pfam Mitochondrial carrier protein 113 196 IPR018108 -
Trre8g03522 305 Pfam Mitochondrial carrier protein 219 300 IPR018108 -
Trre8g03522 305 Pfam Mitochondrial carrier protein 9 97 IPR018108 -
Trre8g03522 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 5 300 - -
Trre8g03522 305 FunFam Mitochondrial carrier protein 2 109 - -
Trre8g03522 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Trre8g03522 305 Gene3D Mitochondrial carrier domain 3 110 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03522 Trre-Chr8 39239945 39249970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03522 25 300 Antiporters AT1G79900 28.125 2.89e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03522 K15109 - gmx:100815087 502.671