Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03507 ATGGATTCTGAGTTCTGGACTTCTCGTCTTGCCGCCGCTAAACGCCACTATTCTCTTCAGCATAATCACCCAACTTCTCATTTAGATCGGTTGGGGATAGATGATTTTGATGTTGAAGAAGAGGTGAGACCAGATTTCCCTTGTCCGTATTGTTATGAAGAGTTTGATATAGGGTCCTTGTGTTCTCATCTTGAAGATGAACATTCATGTGAATCAAGAGTCACGATTTGTCCTGTATGCTCAGTTAAAGTTGCACGCGACATGTTGAGCCACATAACGCTGCAGCACGGACACCTATTTAAGATACAGAGAAGGCGCAGGTTAAGAAGAGTTGCTATTCCTAACAGTCAGACGTTGTCTCTATTGGGTCGAGATCTCCGTGAAGCTCATTTACAGGTGCTTCTTAATGGTGGCGGTGGTGGATACCGGTCGCACAGTAACACAGTATCCAATGCTTCTACTGATCCATTCCTATCCTCTTTCATTTTGAATTACCCTGCATGTGAAGCAGAAGAAATCTCCAAATCTGTGGTAACAAGTGCTGAAGATTCTTCAACAAAGAATACATCAACACCTGTACAACATATTTGGAAATCAAGTTTTGATCCATCATTGAGCATTGAAGAGCGGGAGAAAAGGATGAGACAAGCTGCCGGGAGGTCTAGTTTTGTGCAGGATTTGTTTATCTCGACCTTGTTAGGCGACTAA 708 0.4308 MDSEFWTSRLAAAKRHYSLQHNHPTSHLDRLGIDDFDVEEEVRPDFPCPYCYEEFDIGSLCSHLEDEHSCESRVTICPVCSVKVARDMLSHITLQHGHLFKIQRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLNGGGGGYRSHSNTVSNASTDPFLSSFILNYPACEAEEISKSVVTSAEDSSTKNTSTPVQHIWKSSFDPSLSIEEREKRMRQAAGRSSFVQDLFISTLLGD 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03507 235 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Trre8g03507 235 SUPERFAMILY TRAF domain-like 46 147 - -
Trre8g03507 235 PANTHER PROTEIN DEHYDRATION-INDUCED 19 32 233 IPR033347 -
Trre8g03507 235 Pfam Stress-induced protein Di19, C-terminal 119 232 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03507 Trre-Chr8 39022889 39025352 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre8g03507 Di19_C 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03507 - - gmx:100792230 400.208