Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03498 ATGATGAATAATTTGCTCTCTCCATCAACCCTTCCATTTACCATATTCGCCACGTTATTGTTTCTCTTCGTTCTTTATTGGCTACGCAGAATCAACAACAGTAGTAATACTGGTGGAGCTTCAAAGACACTCCCACCACCACCACCAGAAGTCGGTGGTGCTTGGCCTTTAATCGGCCACCTCCACCTCTTAACTGGTTCCCAACCACCTCACGTCGTCTTGGGGAATTTAGCCGATAAATACGGACCAATCTTCACCATACGTTTAGGTGTTCATCGAACTTTAGTAATAAGCAATTATGAAATGGCAAAACAGTGTTTCACAATAAACGACAAAGCATTTGCTTCACGTCCTAAATCTGTAGCATTTGAAATTCTGGGATACAACTTTTCCATGTTTGGTTTCAGTCCCTATGGTTCTTATTGGCGTACCATGCGCAAGATCGCCACCGTCCACGTCCTCTCCACTCAACGGATAGAGATATTGCTCAAACACGTGATGGAATCTGAGGTGGAAACAGCAATGAAAGGTAGTTACGATTTCTGGCAGAAGATGAAGAACGAGGGTAATCCAGAAAGGGCAATTACGGAAATGAAAAAATGGTTTGGAGATATAGCGATAAACGTTATGTTTAGAACGGTTATGGGTAAACGTTTTGACGGTGATGAAGAAGAGAATCAACGGATCAGAAAAGCACTTAGGGGATTGTTCGATCTCACCGGTTCGTTTGTTATATGTGACACGTTGCCGTATCTGAGATGGTTGGATTTAGATGGAAAAGAGAAGGAGATGAAGAAAACGGCGAAAGAGTTGGATGAGTTTGTTTGTGTTTTGCTTGATCAACACAAACGTAAAAGGAGGAACTCTAGATCTGGTGGCGAACTTGACTTCATGGATGTGCTCCTTTCCACCGTTGATGATCATGATTTGGACGGTCGTGATTCCGACACCGCAATCAAAGCTACTTGTCTGGCACTAATTCTAGCTGGCACAGACACAACATCAGGAACATTGACTTGGGCTCTCTCTTTACTTCTCAACAACCGTGAAATCCTAAACAAGGTCATTGAAGAACTAGATACACAAATTGGTATGGAAAATATGGCAATGAAAACAGATTTGACAAAATTGAAGTATATTCCGGCCATTATCAAGGAAACATTGCGTTTGTACCCGGCCGCACCACTCAATATTCCTCATGAGTCCATTGAAGATTGTATTGTTGGTGGATACCATGTGCCTGCTGGGACGCGTCTTTTAACCAATGTTTCAAAACTTCAACGAGATCCAATGTTATACTTGGATCCGTTGGAGTTTCGACCAGAGAGATTTCTCACAACTCACAAGGATGTCGATGTTAAGGGTCAACATTTTGAATTGATTCCATTTGGTGCGGGTAGAAGAATGTGCCCTGGAATCTCATTTGGTCTTCAACTTATGCAAATAACACTTGCTACTTTGTTGCATGGGTTTGATATAGTGACTCCAAATGAAGAACCAGTTGATATGGTTGAACATAACGGCCTCACTACTATCAAAGCCTCTCCACTTGAAGTCATTCTCACTCCTCGTTTGTCTACCCAAGTTTTTAGTCAAAATCCATGA 1605 0.4206 MMNNLLSPSTLPFTIFATLLFLFVLYWLRRINNSSNTGGASKTLPPPPPEVGGAWPLIGHLHLLTGSQPPHVVLGNLADKYGPIFTIRLGVHRTLVISNYEMAKQCFTINDKAFASRPKSVAFEILGYNFSMFGFSPYGSYWRTMRKIATVHVLSTQRIEILLKHVMESEVETAMKGSYDFWQKMKNEGNPERAITEMKKWFGDIAINVMFRTVMGKRFDGDEEENQRIRKALRGLFDLTGSFVICDTLPYLRWLDLDGKEKEMKKTAKELDEFVCVLLDQHKRKRRNSRSGGELDFMDVLLSTVDDHDLDGRDSDTAIKATCLALILAGTDTTSGTLTWALSLLLNNREILNKVIEELDTQIGMENMAMKTDLTKLKYIPAIIKETLRLYPAAPLNIPHESIEDCIVGGYHVPAGTRLLTNVSKLQRDPMLYLDPLEFRPERFLTTHKDVDVKGQHFELIPFGAGRRMCPGISFGLQLMQITLATLLHGFDIVTPNEEPVDMVEHNGLTTIKASPLEVILTPRLSTQVFSQNP 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03498 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Trre8g03498 534 FunFam Cytochrome P450 82C4 39 522 - -
Trre8g03498 534 Pfam Cytochrome P450 49 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 Gene3D Cytochrome P450 33 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PANTHER CYTOCHROME P450 82C3-RELATED 19 529 - -
Trre8g03498 534 Coils Coil 342 362 - -
Trre8g03498 534 CDD CYP82 82 524 - -
Trre8g03498 534 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03498 534 SUPERFAMILY Cytochrome P450 48 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03498 Trre-Chr8 38983127 38986279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03498 49 530 Cytochrome P450 AT4G31940 47.677 2.14e-167 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03498 - - mtr:25493100 776.548