Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03482 ATGGAGTCACGAGTGTTGTCACGCGCCACCACTTTCTCCTCTCTTCCTCGTCTTAACAAACTTCATCGGGAACACCTCGCCACCAATGCTTCACTTCTCTCCGTGAAATCGATCGGATCAGTTTCCGATGGCGGGAACCTTGTCTGGGGAAGACAACTTCGTCCGGAGTTGTGTTCACCGGCGCTTAAGAAAGGTGCTGTGCTTCTTCGTCCTTGTCTTGCCGCTGCCGAGGGAAAAGATTCCGCCGGGGAAGAGAAAGTGGCTCCGACCGGGTTTTTCAGTCGGTATCCGGCCCTTGTTACCGGTTTTTTCTTCTTCACTTGGTACTTCTTGAATGTGATTTTCAACATCCTCAACAAGAAGATCTACAATTATTTTCCCTATCCTTACTTCGTGTCGGTTATCCATTTATTTGTGGGAGTGGTTTACTGTTTGATAAGCTGGACCGTGGGCCTTCCTAAGCGTGCTCCAATTGATGCCAACCTGCTGAAGTTGCTGATTCCAGTAGCTGTGTGTCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACACATACCATTAAAGCTCTTGAGCCATTCTTTAATGCTGCTGCTTCACAGTTCATACTTGGACAATCAATTCCTATCACTCTATGGCTCTCACTGGCTCCTGTTGTTCTTGGTGTGTCACTTGCATCTTTGACTGAGCTCTCATTCAACTGGCTGGGATTCATAAGTGCTATGATTTCAAATATTTCCTTTACATACAGGAGTATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATATCTATGCCTACATTTCAATCATTGCTCTCATTGTCTGCATACCACCAGCCTTAATTCTGGAAGGTCCTACACTGTTGAAGACCGGGTTCAATGATGCAATTGCTCAAGTTGGTTTGGTCAAGTTTGTATCAGATCTCTTTTGGGTTGGTATGTTTTACCATCTCTACAACCAGGTGGCCACCAACACACTAGAGAGAGTTGCTCCTCTTACTCATGCAGTTGGCAACGTACTCAAACGTGTATTTGTTATTGGATTTTCGATAATTATCTTCGGTAACAAGATTTCCACCCAAACTGGCATAGGAACTGCCATTGCAATTGCTGGAGTAGCACTCTACTCCTTCATCAAAGCCAAGATTGAAGAAGAGAAGCGAGTGAGTCTTGTTTTCATTTGA 1215 0.4469 MESRVLSRATTFSSLPRLNKLHREHLATNASLLSVKSIGSVSDGGNLVWGRQLRPELCSPALKKGAVLLRPCLAAAEGKDSAGEEKVAPTGFFSRYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWTVGLPKRAPIDANLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVLGVSLASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALILEGPTLLKTGFNDAIAQVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTAIAIAGVALYSFIKAKIEEEKRVSLVFI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03482 404 PANTHER SOLUTE CARRIER FAMILY 35 102 392 - -
Trre8g03482 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 319 388 - -
Trre8g03482 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 236 - -
Trre8g03482 404 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 397 IPR004696 GO:0016020|GO:0022857|GO:0055085
Trre8g03482 404 Pfam Triose-phosphate Transporter family 100 387 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03482 Trre-Chr8 38698520 38701424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03482 1 400 Antiporters AT5G46110 79.024 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03482 K15283 - gmx:732611 695.271