Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03481 ATGGAGTCACGAGTGTTGTCACGCGCCACCACTTTCTCCTCTCTTCCTCGTCTTAACAAACTTCATCGGGAACACCTCGCCACCAATGCTTCACTTCTCTCCGTGAAATCGATCGGATCAGTTTCCGATGGCGGGAACCTTGTCTGGGGAAGACAACTTCGTCCGGAGTTGTGTTCACCGGCGCTTAAGAAAGGTGCTGTGCTTCTTCGTCCTTGTCTTGCCGCTGCCGAGGGAAAAGATTCCGCCGGGGAAGAGAAAGTGGCTCCGACCGGGTTTTTCAGTCGGTATCCGGCCCTTGTTACCGGTTTTTTCTTCTTCACTTGGTACTTCTTGAATGTGATTTTCAACATCCTCAACAAGAAGATCTACAATTATTTTCCCTATCCTTACTTCGTGTCGGTTATCCATTTATTTGTGGGAGTGGTTTACTGTTTGATAAGCTGGACCGTGGGCCTTCCTAAGCGTGCTCCAATTGATGCCAACCTGCTGAAGTTGCTGATTCCAGTAGCTGTGTGTCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACACATACCATTAAAGCTCTTGAGCCATTCTTTAATGCTGCTGCTTCACAGTTCATACTTGGACAATCAATTCCTATCACTCTATGGCTCTCACTGGCTCCTGTTGTTCTTGGTGTGTCACTTGCATCTTTGACTGAGCTCTCATTCAACTGGCTGGGATTCATAAGTGCTATGATTTCAAATATTTCCTTTACATACAGGAGTATCTATTCAAAGAAAGCCATGACTGATATGGATAGTACCAATATCTATGCCTACATTTCAATCATTGCTCTCATTGTCTGCATACCACCAGCCTTAATTCTGGAAGGTCCTACACTGTTGAAGACCGGGTTCAATGATGCAATTGCTCAAGTTGGTTTGGTCAAGTTTGTATCAGATCTCTTTTGGGTTGGTATGTTTTACCATCTCTACAACCAGGTGGCCACCAACACACTAGAGAGAGTTGCTCCTCTTACTCATGCAGTTGGCAACGTACTCAAACGTGTATTTGTTATTGGATTTTCGATAATTATCTTCGGTAACAAGATTTCCACCCAAACTGGCATAGGAACTGCCATTGCAATTGCTGGAGTAGCACTCTACTCCTTCATCAAAGCCAAGATTGAAGAAGAGAAGCGACAAGCAAAAGCAGCATAA 1212 0.448 MESRVLSRATTFSSLPRLNKLHREHLATNASLLSVKSIGSVSDGGNLVWGRQLRPELCSPALKKGAVLLRPCLAAAEGKDSAGEEKVAPTGFFSRYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWTVGLPKRAPIDANLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVLGVSLASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALILEGPTLLKTGFNDAIAQVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTAIAIAGVALYSFIKAKIEEEKRQAKAA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03481 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 319 388 - -
Trre8g03481 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 236 - -
Trre8g03481 403 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 397 IPR004696 GO:0016020|GO:0022857|GO:0055085
Trre8g03481 403 Pfam Triose-phosphate Transporter family 100 387 IPR004853 -
Trre8g03481 403 PANTHER SOLUTE CARRIER FAMILY 35 102 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03481 Trre-Chr8 38698520 38701508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03481 1 401 Antiporters AT5G46110 78.589 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03481 K15283 - gmx:732611 703.745