Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03479 ATGGTTCAGTTTCTAAACACTCCTATTCTCGTTGATTCCTACAATCATTTGGCGAAATGGACTTCTGGGGAGGATCTCACTGTTGTTGAGACTGCATTAGGCCCTGAAAGTTATTGGGATTTCATTCATCAAAATTCTGCATACTTGAATACTTTTAATGAAGCTATGGAAAGTGATTCTCATGTTGTGAGGTTGGCTTTGAGAGACTGTAGGTCTGTTTTTGAAGGAATAGGTTCGTTGGTCGATGTTGGTGGTGGAACTGGAAACACAGCTAAGATTATATGCGAGACATTTCCGGAGCTCAAGTACATTGTCTTGGACCTTCCACAGGTTGTTTTGGGTTTAGCAGGAAGCAATAACTTGAGTTTTGTCGGTGGTAACATGTTTAAATCTATCCCTCAAGCCGATGCTGTTCTGCTCAAGTGGGTGTTACACAATTGGAGTGATGATGATTGCATAAAGATACTAAAAAATTGTAAGAATGCTATATCAGGAAAAGGGAAAGGAGGAAAAGTGATAATCATAGATGTAGTAATTAATGAAAAACAAGATGATCATGAAATGACAGAAGTAAAACTTTTACTTGATGTGATTATGATGACTAGTCTCAATGGAAAAGAGAGAAATGAAAAGGAATGGAAACAACTTTTCTTACAAGCTGGCTTCAAATCTTACAAGATATTCCCCACATTTGGTTTTAGGTCTCTAATTGAGCTTTATCCTTAA 726 0.3733 MVQFLNTPILVDSYNHLAKWTSGEDLTVVETALGPESYWDFIHQNSAYLNTFNEAMESDSHVVRLALRDCRSVFEGIGSLVDVGGGTGNTAKIICETFPELKYIVLDLPQVVLGLAGSNNLSFVGGNMFKSIPQADAVLLKWVLHNWSDDDCIKILKNCKNAISGKGKGGKVIIIDVVINEKQDDHEMTEVKLLLDVIMMTSLNGKERNEKEWKQLFLQAGFKSYKIFPTFGFRSLIELYP 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03479 241 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 241 IPR016461 GO:0008168
Trre8g03479 241 CDD AdoMet_MTases 80 179 - -
Trre8g03479 241 PANTHER O-METHYLTRANSFERASE 28 226 IPR016461 GO:0008168
Trre8g03479 241 FunFam O-methyltransferase ZRP4 1 241 - -
Trre8g03479 241 Pfam O-methyltransferase domain 14 223 IPR001077 GO:0008171
Trre8g03479 241 Gene3D Vaccinia Virus protein VP39 1 241 IPR029063 -
Trre8g03479 241 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 239 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03479 Trre-Chr8 38687638 38688685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03479 37 239 Monolignol Biosynthesis Gene Families AT5G54160 37.561 1.23e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03479 K22588 - gmx:100818947 317.775