Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03464 ATGGATTTCAGTACAAATGCTTCTGAAGAAACTGAACTGTATCATGCTCAAATCCATTTGTACAAACATGTATACAACTTTGTAAGTTCCATGGCACTCAAATCTGCTATGGAACTTGGCATAGCTGATGCAATCCATAACCATGGAAAACCAATGACTCTTTCTGAATTAGCTTCATCTTTGAAACTCCACCCTTCTAAAGTTAACATTGTTTATCGATTCTTGCGCCTTTTAACACACAATGGTTTTTTTGTGAAAACAACAGTGAAAAGCAAAGAAGGGGAAGAAGAAATAGCTTATGCTCTCACACCATCTTCAAAGCTTCTCATAAGTGGAAAATCAACATGTTTATCAACACTTATTAAAGGAGCACTTCATCCAAGTTCTATAGACATGTGGAACTCTTCAGAGACATGGTTCAAAGAGGATAAGGAACAAACTCTCTTTGAGTGTGCAAAAGGGGAGAACTATTGGGATTTTCTCAACAGAGATTCTGATACTTTAAGTATGTTTCAAGATGCTATGGCTGCTGATTCTAGAATGTTCAAGCTTGCTCTTAAAGAAAACAAGCCTGTGTTTGAGGGTTTGGAGTCTCTTGTTGATGTGGCTGGTGGAACTGGTGGTGTCACAAAACTCATTCATGAAGCTTTTCCTAACATCAAATGTACTGTTTTTGATCAACCACAGGTTGTTGGTAACTTAACCGGAAATGAAAATTTGAACTTTGTTGGTGGTGATATGTTCAAATCCATCCCTCCTGCAGATGCTGTTTTACTCAAGTGGGTTTTGCATGATTGGAACGATGAACTATCCTTACAAATATTGAAGAACAGCAAAGAAGCTATTTCTCACAAAGGAAAAGATGGAAAAGTGATTATCATTGACATATCGATTGATGAAACAAGTGATGATCATGGATTAACCGAGTTGCAATTGGAATATGATTTGGTGATGCTTACAATGTTTCTTGGTAAGGAAAGAACCATGACAGAATGGGAGAAACTCATACACGATGCAGGTTTCAGTAGCTACAAAATTATCCCTATCAGTGGCTTCAAGTCTCTAATTGAAGTTTATCCTTAA 1083 0.3712 MDFSTNASEETELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNIVYRFLRLLTHNGFFVKTTVKSKEGEEEIAYALTPSSKLLISGKSTCLSTLIKGALHPSSIDMWNSSETWFKEDKEQTLFECAKGENYWDFLNRDSDTLSMFQDAMAADSRMFKLALKENKPVFEGLESLVDVAGGTGGVTKLIHEAFPNIKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPPADAVLLKWVLHDWNDELSLQILKNSKEAISHKGKDGKVIIIDISIDETSDDHGLTELQLEYDLVMLTMFLGKERTMTEWEKLIHDAGFSSYKIIPISGFKSLIEVYP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03464 360 FunFam O-methyltransferase ZRP4 112 360 - -
Trre8g03464 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Trre8g03464 360 Gene3D Vaccinia Virus protein VP39 110 360 IPR029063 -
Trre8g03464 360 Pfam O-methyltransferase domain 133 342 IPR001077 GO:0008171
Trre8g03464 360 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Trre8g03464 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 359 IPR029063 -
Trre8g03464 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 360 IPR016461 GO:0008168
Trre8g03464 360 SUPERFAMILY "Winged helix" DNA-binding domain 11 113 IPR036390 -
Trre8g03464 360 Gene3D - 2 109 IPR036388 -
Trre8g03464 360 PANTHER O-METHYLTRANSFERASE 15 345 IPR016461 GO:0008168
Trre8g03464 360 FunFam Coniferyl alcohol 9-O-methyltransferase 3 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03464 Trre-Chr8 38379102 38380498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03464 28 358 Monolignol Biosynthesis Gene Families AT5G54160 33.913 5.34e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03464 K22588 - tpra:123917427 641.343