Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03463 ATGGCTTTGAATACAAACGGTTCTGAAGGAAGTGAACTGTATCATGCTCAAATCCATTTGTACAAACATGTCTACAATTTTGTAAGTTCCATGGCACTCAAATCTGCTATGGAACTTGGCATAGCTGATGCAATCCATAACCATGGAAAACCAATAACACTTTATGAATTAGCTTCATCTTTGAAACTTCACCCTTCAAAAGTTAACATCTTATATAGATTTTTGCGCTTGTTAACACACAATGGTTTCTTTGCAAAAACAACAGTTAAAGGTGAAAAAGAAGAACAAGAAATAGCTTATTCTCTTACACCATCTTCAAAGCTTCTTGTAAGTGGTAAACCAACATGTTTATCAGCAATTGTTAAAGGAGCACTTCATCCAAGTTCTTTAGATATGTGGAGTGCTTCAAAGAAATGGTTCAATGAAGAAAAGGAACAAACACTTTATGAATGTGCAACAGGGGAGAGTTTTTGGGATTTTCTTAATAAAGATTCTGAATCTGATACTTTGAGTATGTTTCAAGATGCTATGGCTGCTGATTCTAGAATGTTCAAGCTTGCTCTTCAAGAGAATAAGCCTGTGTTTGAGGGTTTGGAGTCTCTTGTTGATGTGGCTGGTGGAACTGGTGGTGTCACAAAACTCATTCATGAAGCTTTTCCTAACATCAAATGTACTGTTTTTGATCAACCACAGGTTGTTGGTAACTTAACTGGTAATGAAAATTTGAACTTTGTTGGTGGTGATATGTTCAAATCTATCCCTCCTGCAGATGCTGTTTTACTCAAGTGGGTTCTTCATGATTGGAATGATGAACAATCCTTAAAGATATTGAAGAACAGCAAAGAAGCTATTTCACACAAAGGGAAAGATGGAAAAGTGATTATCATCGACATATCAATTGATGAAACAAGTGATGATCGTGGATTAACTGAGTTGCAATTGGACTATGACTTGGTGATGCTTACAATGTTTCTTGGTAAAGAAAGAACAAAGAAAGAATGGGAGAAACTCATTAACGATGCAGGTTTCAGCAGCTACAAGATATCTCCTATATCTGGCTTCAAATCTCTCATCGAAGTTTATCCTTAA 1089 0.36 MALNTNGSEGSELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPITLYELASSLKLHPSKVNILYRFLRLLTHNGFFAKTTVKGEKEEQEIAYSLTPSSKLLVSGKPTCLSAIVKGALHPSSLDMWSASKKWFNEEKEQTLYECATGESFWDFLNKDSESDTLSMFQDAMAADSRMFKLALQENKPVFEGLESLVDVAGGTGGVTKLIHEAFPNIKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPPADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKKEWEKLINDAGFSSYKISPISGFKSLIEVYP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03463 362 Gene3D - 1 109 IPR036388 -
Trre8g03463 362 FunFam Coniferyl alcohol 9-O-methyltransferase 4 109 - -
Trre8g03463 362 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Trre8g03463 362 PANTHER O-METHYLTRANSFERASE 16 347 IPR016461 GO:0008168
Trre8g03463 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 361 IPR029063 -
Trre8g03463 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 362 IPR016461 GO:0008168
Trre8g03463 362 Gene3D Vaccinia Virus protein VP39 110 362 IPR029063 -
Trre8g03463 362 SUPERFAMILY "Winged helix" DNA-binding domain 11 113 IPR036390 -
Trre8g03463 362 Pfam O-methyltransferase domain 133 344 IPR001077 GO:0008171
Trre8g03463 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Trre8g03463 362 FunFam O-methyltransferase ZRP4 112 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03463 Trre-Chr8 38370476 38372072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03463 28 348 Monolignol Biosynthesis Gene Families AT5G54160 33.841 4.17e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03463 K22588 - ag:AAY18581 648.662