Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03456 ATGGACTTCATTGGGCCTTTGAAGATTTTTAAGAAGTTTGGCAACTATGAGCAGAGAATTGATGCTATTTTTAACAAGTATGATCCTATCATTGAAAAGGTTATCAAAAAAAGACAAGAAATTGTGAACAAAAGAAGAAGTGGAGAAATTCAAGATGGTGAGGAGGAGAGTGTAGTTTTTCTTGATACCTTGCTTGAATATGCTCAGGATGAAACCATGGAGATCAAAATTACCAAGGAACAAATCAAGGGTCTTGTTGTGGATTTCTTTTCTGCTGGAACAGACTCCACGGCTGTGGCAACAGAATGGACTTTGGCTGAGCTCCTCAATAACCCGAGGGTGTTGAAGAAAGCTCGAGAGGAGATAGAATCTGTTGTAGGAAAAGATAGACTTGTTGATGAGTCAGATGTTCAGAATCTTCCTTACATAAGAGCTGTTGTGAAGGAGGCATTCCGCTTGCACCCACCACTACCTGTGGTCAAGCGAAAATGTACTCAAGAGTGTGAGATCAATGGGAGGATGTGCCCCGGAGCCAATTTGGCTACGGCAGGAATGGCCACACTACTTGCATCTATTATCCAATGCTTTGATCTACGAGTACCCGGTGCACATGGACAAATTTTACATGGTGATGATGCTAAAGTTAGCATGGAAGAAAGACCTGGTCTGACAGTTCCAAGAGCACATAATCTCATGTGTGTTCCACTTGCAAGAGCTGGTGTTGCAGCTAAACTCATTTCGTCCTAA 747 0.423 MDFIGPLKIFKKFGNYEQRIDAIFNKYDPIIEKVIKKRQEIVNKRRSGEIQDGEEESVVFLDTLLEYAQDETMEIKITKEQIKGLVVDFFSAGTDSTAVATEWTLAELLNNPRVLKKAREEIESVVGKDRLVDESDVQNLPYIRAVVKEAFRLHPPLPVVKRKCTQECEINGRMCPGANLATAGMATLLASIIQCFDLRVPGAHGQILHGDDAKVSMEERPGLTVPRAHNLMCVPLARAGVAAKLISS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03456 248 PRINTS P450 superfamily signature 145 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03456 248 PRINTS P450 superfamily signature 92 109 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03456 248 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 173 229 - -
Trre8g03456 248 Gene3D Cytochrome P450 1 172 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03456 248 PRINTS E-class P450 group I signature 81 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03456 248 PRINTS E-class P450 group I signature 101 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03456 248 PRINTS E-class P450 group I signature 175 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03456 248 Gene3D Cytochrome P450 173 238 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03456 248 SUPERFAMILY Cytochrome P450 7 238 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03456 248 Pfam Cytochrome P450 11 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03456 Trre-Chr8 38290352 38291515 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03456 16 239 Cytochrome P450 AT3G20110 33.213 4.06e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03456 - K23179 gmx:100037450 272.322