Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03449 ATGGGTTCTGAGAATGGGTGCAGAGCAAATATCATCCACAATCATGGCCAACCCATTACTCTTCCCCAACTTCTCTCGGCTCTTCGAATTCCTGAAGCAAAAGCCGTTTGTGTTCAAAGTCTAATGCGTTTATTGGCACACAATAACTTCTTTACAATTGTTGAAATGGAAGGGAAAGAAGCATATGCTCTTGCCCCACCATCAGAGCTGCTTGTCAAAGGCACTGACCATTGTTTAACTTCAATGGTTCAGCTAATAACAAATCCAAATCTTGTTGATTTGTACAATCATTTAAGTAAATGGACTTCCGGGGACGAGCTCACAATCTTTGAGACTGCATCAGGCCCAGGAGATTATTGGGGTTTTATTCATCAAAATCCCACACATTTGAAGTCCTTCAATGAGGCTATGGAAAGTGATTCTCATGTGATGAGATTGGCACTGAGTGATTGCAAGCCTGTTTTTGAAGGCTTGGGTTCTCTGGTTGATGTTGGAGGTGGAACTGGAAACACAGCTAAAATCATCTGTGAGATATTTCCTGTGTTAAAATGCACAGTGTTGGATCTTCCGCAGGTGGTGGCAGGCTTACCAGGAACTGAAAAATTGAGTTTTGTTGGCGGAAACATGTTCAAATCTATCCCTCAAGTTGATGCAATCTTACTTAAGTGGATTTTGCATGACTGGAATGACGATGACTGTGTAAAGATACTCCAAAATTGTAAAGAAGCAGTTTTAAGAAAAGGCAAAGGAGGAAAAGTGGTTATAATAGATATTGTGATAAATGAAAAGCAAGATAAGCATGAAATGACAGAAGTCAAGCTTTTCTTTGACATAATTATGATGGCTAGTTTTAATGGAAGAGAAAGAGATGAAAATAACTGGAAACAAATTTTCACAAAAGCAGGGTTCACACACTACAAAATATTTCCCATATTCGGTTTTAGATCACTTATCGAGCTTTGTGTTTAG 969 0.3901 MGSENGCRANIIHNHGQPITLPQLLSALRIPEAKAVCVQSLMRLLAHNNFFTIVEMEGKEAYALAPPSELLVKGTDHCLTSMVQLITNPNLVDLYNHLSKWTSGDELTIFETASGPGDYWGFIHQNPTHLKSFNEAMESDSHVMRLALSDCKPVFEGLGSLVDVGGGTGNTAKIICEIFPVLKCTVLDLPQVVAGLPGTEKLSFVGGNMFKSIPQVDAILLKWILHDWNDDDCVKILQNCKEAVLRKGKGGKVVIIDIVINEKQDKHEMTEVKLFFDIIMMASFNGRERDENNWKQIFTKAGFTHYKIFPIFGFRSLIELCV 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03449 322 PANTHER O-METHYLTRANSFERASE 10 307 IPR016461 GO:0008168
Trre8g03449 322 Gene3D Vaccinia Virus protein VP39 72 321 IPR029063 -
Trre8g03449 322 Gene3D - 8 71 IPR036388 -
Trre8g03449 322 Pfam Dimerisation domain 10 46 IPR012967 GO:0046983
Trre8g03449 322 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 322 IPR016461 GO:0008168
Trre8g03449 322 Pfam O-methyltransferase domain 95 303 IPR001077 GO:0008171
Trre8g03449 322 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 319 IPR029063 -
Trre8g03449 322 FunFam O-methyltransferase ZRP4 73 322 - -
Trre8g03449 322 PIRSF O-mtase 9 322 IPR016461 GO:0008168
Trre8g03449 322 SUPERFAMILY "Winged helix" DNA-binding domain 10 75 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03449 Trre-Chr8 38251146 38252473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03449 11 320 Monolignol Biosynthesis Gene Families AT5G54160 33.851 6.84e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03449 K22588 K13262 gmx:100818724 363.614