Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03444 ATGAAGAAGATTTCGAAGAGCAGCTGCAAGTCTGCATCACACAGGCTTTTTAAGGACAAGGCGAAGAACCGTGTTGATGATCTGCAGCTGATGTTCCTGGATTTGCAGTTTGCTAGGAAGGAAAGCCGTACAGTTGATGCTGCGGTTCTTGAGGAACAGGTCCATCAGATGCTTCGTGAGTGGAAGTCGGAGCTCAATGAGCCTTCTCCTGCTTCTTCTTTGCAGCAAGATGGAAGTCTTGGATCATTTTCCACCGATATCTGTCGGCTTTTGCAGCTCTGTGAGGAGGAAGATGATGCCTCTAGTCCATTAGCTGCACCTAAGCCTGAACCTAATGACCAGACTCTGCAGACTGGGGGAAAGGTCGTTTTTCAAGAGGGCCAACAGCAACATGATTTCCCATTGGTTGATGAGCGCAAACAGTCAACCTCAGGAGTTCAAAACGTGGCAACTATCAACCAGGATGGGCCTGCTTTAGAATATCACCAGTTTGATTTACATCAGGACTTTGATCACGGCTTATATACTGGTTTCAATGGTACAGGTTATTCTGAGGAGGAAGCTATTCCTCATATATCTAGCTATCTACCAAGTGTATGCCCTCCTCCATCTGCTTTCTTGGGTCCAAAGTGTGCACTTTGGGACTGTCCAAGGCCCGCACAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTGAACGAAGGGCCGCCAGGCATGGCTCCAGTTCTACGACCTGGGGGCATTGGTTTAAAGGATAATTTACTTTTTTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCGGAATGCGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCGCCTGAGCTTTTTGATCTTTCTGTTCTTGAGGGAGAGACTATTAGGGAATGGCTCTTCTTCGATAAACCTCGAAGAGCATTTGAAAGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTACAGTGGGCGTGGTTGGCATGAATCTAGAAAGCAAGTTATTAATGAGTTTGGAGGTCTGAAGAGATCCTATTATATGGATCCACAACCTCTGAACCATTTTGAATGGCACCTTTATGAATATGAGATTAGCAAGTGTGATGCATGTGCCTTATACCGTTTAGAACTAAAACTTGTTGATGGGAAGAAGAACTCAAAAGCAAAATTAACAAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGTAAAGCTCTCTGCCGAGTTTCCGCCTGATAACAAAAGGCCTGCCAAAGGCAGAGCCAAGATTAATGCCAAAGTTGGCATGGGTGCTGTCTATTCAGCTTCACACAGAGTGACCCCGCTAAATGGAACATACGAATATGGTTTAGCTGCACCATATGACTATCTTGTCGAGAACATGGGCGACTATTATGGGACATGA 1434 0.4561 MKKISKSSCKSASHRLFKDKAKNRVDDLQLMFLDLQFARKESRTVDAAVLEEQVHQMLREWKSELNEPSPASSLQQDGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNDQTLQTGGKVVFQEGQQQHDFPLVDERKQSTSGVQNVATINQDGPALEYHQFDLHQDFDHGLYTGFNGTGYSEEEAIPHISSYLPSVCPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKLTNDSVADLQKQMVKLSAEFPPDNKRPAKGRAKINAKVGMGAVYSASHRVTPLNGTYEYGLAAPYDYLVENMGDYYGT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03444 477 Coils Coil 398 418 - -
Trre8g03444 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 472 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03444 Trre-Chr8 37993966 37997948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03444 3 475 VOZ-9 Transcription Factor Family AT1G28520 70.265 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Trre8g03444 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03444 - - gmx:100798565 915.99