Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03433 ATGGAAACACTTGGTGCATTTTTCTCTATTTATGTGCACATTTGTATGCTAAGTTTATTATGCTTTATGGTTACAATTGAAGCTTCAAAGAAAAATAAGGTCTCTGCCATATATGTGTTTGGAGACTCTACGGTAGACCCAGGAAACAACAATTATGTGAACACAGCTTTTAAAAGTGATTTTCCACCTTATGGTAGAGACCTTGCTAACAAAAGTCCTACTGGAAGGTTCTCAAATGGGAAGCTTGGCACTGATTTTATTGCCTCATATTTGGGCTTGAAAGAGTTGGTGCCACCATATTTGGATCCAAATCTCAGCGATGATGAGCTTATGACAGGAGTTAGTTTTGCCTCTGCTGGTTCTGGTTTTGATCCACTCACACCAACTCTAAGTAATGTGGTCCCAATACAAAAGCAACTGGAATATTTCAAACAATACAAAAAGAGGTTGGAGAGTAAGCTTGGTAGGCATAAAACTGAACATCATATGAACAACGCTTTATTTTTCATAAGCGCTGGTACAAATGACTTCGTTATTAATTATTTTACGGTACCAATAAGAAGAAGAAGCTTTGACGTTATAACCTATGGCCATTTCGTGCTTCAACATGTCAAAGATTTCATACAGAATTTGTGGACAGAAGGTGCTAGAAAAATTGCTTTTGTTGGACTACCTCCGATGGGATGCTTGCCAATCATGATCACCTTCCATTCCAACGATGCATTTTTCCAACGAAGTTGTGTGGACAAATATTCTGCTGTAGCAAGAGCTCACAATATGATTCTTCAACATGAATTGTTCTTAATGCAACTCAATTTCTCTAATCCTCGTGATCATGGTGCTAAGATCTCTTACATTGATATATATGGGCCCTTAGCTAACATGATTCAAGGGCATGGACTTCTTGGATTTGATGAGGTTGATCGTGGGTGTTGTGGAAGTGGTTACATTGAAGCAACATATATGTGCAATCGTGTTTCTCATGTGTGCTCTGATCCATCAAAATATGTATTTTGGGATTCAATACACCCTACGGAGAAGGCATATCACAACCTATTCACCGCAAACCGTCACATCCTTGATGCCCTCATCAAGAACTAG 1101 0.3878 METLGAFFSIYVHICMLSLLCFMVTIEASKKNKVSAIYVFGDSTVDPGNNNYVNTAFKSDFPPYGRDLANKSPTGRFSNGKLGTDFIASYLGLKELVPPYLDPNLSDDELMTGVSFASAGSGFDPLTPTLSNVVPIQKQLEYFKQYKKRLESKLGRHKTEHHMNNALFFISAGTNDFVINYFTVPIRRRSFDVITYGHFVLQHVKDFIQNLWTEGARKIAFVGLPPMGCLPIMITFHSNDAFFQRSCVDKYSAVARAHNMILQHELFLMQLNFSNPRDHGAKISYIDIYGPLANMIQGHGLLGFDEVDRGCCGSGYIEATYMCNRVSHVCSDPSKYVFWDSIHPTEKAYHNLFTANRHILDALIKN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03433 366 PANTHER GDSL ESTERASE/LIPASE EXL3 20 353 - -
Trre8g03433 366 CDD SGNH_plant_lipase_like 36 350 IPR035669 -
Trre8g03433 366 Pfam GDSL-like Lipase/Acylhydrolase 37 353 IPR001087 GO:0016788
Trre8g03433 366 SUPERFAMILY SGNH hydrolase 65 353 - -
Trre8g03433 366 Gene3D SGNH hydrolase 23 362 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03433 Trre-Chr8 37652956 37656835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03433 36 352 Pollen Coat Proteome AT1G75910 33.538 9.30e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03433 - - gmx:100804919 575.474