Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03426 ATGATTTCTAATTCCTTCTTATTGGCTACGATTTTGTTCCTTATTCCTTTCCTTCTCCAACTTTTCTCATACTTGAAGAAAAACAAGAAATCACATCATTTACCACCACACCCTCCAAGTCCACCAGCAATACCAATAATTGGCCATCTCCATCTCCTCAAACCACTCATTCATCATGCCTTTCGAGACCTTTCTAATAAATATGGCCCTCTTATATCCCTTCGACTTGGGTCCGCTCGATTTATTGTTGTTAACACTCCAACACTCGCCAAAGAGGTTCTCAAGACAAATGAGGTTGCTTATTCGCACCGTAAAATGAACATAGCCATTAACATGGTTGTCTATGATGACGCAACTTTTGCTTTTGCCCCCTATGGGTCATATTGGAAATTTATTAAAAAGCTTAGCACCACTGAGCTCTTGGGTAACCGAACCATTGGACAATTCCAACCGATTCGAACTCAAGAACTCCATCAATTCGTTCAAACTTTGACATATAAATCTAAGGCTGAAGAAAGCGTGAACCTCACACAAGCTTTGGTAAAGCTTTCCAACAACATAATATCGCGAATGATGTTGAGCATGGAGACCTCAGGGACGGACAATCAGGCAGAACAAGCTAGGACTTTAGTTCGGGAGGTAACACAAATTTTTGGAGAATTTAATATTTCGGATTTTATAGGGTTTTGCAAGAATTTCGACATTCAAGGTTTTAAAAAAAGGGCCTCAGACATACACAAAAGATATGATGCTTTGTTGGAGAAGATTATTTCTGATCGCGAAGGATCAAGAAGGAAAACCAAGGTAATAGAGGGTGGTTGTGAGAATGGAGATGAGAGACTAAAGGATTTTCTTGACATTTTGCTTGATGTCCTTGAGGAGAAAGACCTTGAAGTCAACTTTACAAGAAATCATATCAAATCATTGATCTTGGATTATTTTACGGCAGCTACCGACACTACTGCCATCTCAGTGGAATGGACCATATCTGAGTTGTTTAACAATCCAAAGGTGCTAAGAAAAGCTCAAGAGGAGGTAGAAAGAGTTATAGGAAAGGAAAGACTAATTTCTGAAGATGACTGTCCAAACCTTCCTTATATAAATGCCATCATAAAAGAAACAATGAGGCTTCACCCTCCAATACCAATGATTATGAGGAAAGGAATGGAAGATTGTGTGGTTGATGGTAACACGATTCCAAAAGGCTCGATGATTTGCGTGAACATTTGGGCCATGGGAAGAGACCAAAAGATATGGGAAAACCCGTTAGAGTTTAGGCCTGAAAGATTTTTAGAAAAGAACGAAGGAAGTAATATAGATATGAAAGGACATCACTTTGAATTGTTGCCATTTGGCTCTGGTAGGAGAGGTTGCCCTGGTATGCCTTTGGCTATGCGCCAGTTACCCACCGTAATTGGTACTTTGATACAATGTTTCGAATGGAAAATGCTTGATTCTGATTCCAAAATCTTAGATCATGATAAAAAAATCGATATGGATGAACGACCTGGATTGACAGCTCCTAGAGCCAATGATCTTATTTGTATTCCAGTTGCAAGATTCAATCCCATTCCTCTTCTTCAACTCTAG 1590 0.3937 MISNSFLLATILFLIPFLLQLFSYLKKNKKSHHLPPHPPSPPAIPIIGHLHLLKPLIHHAFRDLSNKYGPLISLRLGSARFIVVNTPTLAKEVLKTNEVAYSHRKMNIAINMVVYDDATFAFAPYGSYWKFIKKLSTTELLGNRTIGQFQPIRTQELHQFVQTLTYKSKAEESVNLTQALVKLSNNIISRMMLSMETSGTDNQAEQARTLVREVTQIFGEFNISDFIGFCKNFDIQGFKKRASDIHKRYDALLEKIISDREGSRRKTKVIEGGCENGDERLKDFLDILLDVLEEKDLEVNFTRNHIKSLILDYFTAATDTTAISVEWTISELFNNPKVLRKAQEEVERVIGKERLISEDDCPNLPYINAIIKETMRLHPPIPMIMRKGMEDCVVDGNTIPKGSMICVNIWAMGRDQKIWENPLEFRPERFLEKNEGSNIDMKGHHFELLPFGSGRRGCPGMPLAMRQLPTVIGTLIQCFEWKMLDSDSKILDHDKKIDMDERPGLTAPRANDLICIPVARFNPIPLLQL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03426 529 Pfam Cytochrome P450 38 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 SUPERFAMILY Cytochrome P450 38 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Trre8g03426 529 FunFam Cytochrome P450 family protein 27 515 - -
Trre8g03426 529 PANTHER STEROID 21-HYDROXYLASE-RELATED 15 510 - -
Trre8g03426 529 Gene3D Cytochrome P450 26 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03426 529 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03426 Trre-Chr8 37414601 37416665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03426 36 520 Cytochrome P450 AT5G06900 40.862 5.20e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03426 K23179 - gmx:100783503 773.852