Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03365 ATGGTAAAAGGATCTGGACACGTTAGTGACAGAGAGCCGGTTTTTGATAGTCCTTCCAAAGTTGAACCAAAACGACCTCATCAATGGGTAATGGATGCTACTGAAGGGGATTTTTTGCCAAATAAGAAGCAAGCAATAGAAGATGCAAATGAAAGATCTAGTTCAGGATTTTCTAATGTAAATTTTACTCCATGGGAGAACAATCACAATTTTCATTCAGTCCCAAGCCAATTTATGGATAGATTATTTGGGTCTGAAACTAGGCCTGTCAATTTCACTGAAAAAAATACTTATGTTTCGGGCGATGATTCTAATGTCAGATCAAAGATGATCAACAATCATTATGTAAATGATGACTCTTTTGGCTTGTCTATATCTCATCCTGCTGGAGATTCTGAAGCATGTATGAATTTTGGGGGAATCAAGAAAGTCAAAGTAAATCAGGTTAAGGATTCTGGTGATGTGCAAGCTCCAGAGGAACATAATTTTGATAGGCAGAGTAAGGGTAGTCTACATCAAACCTATAATGGGGAAGTTGAGACAAGATCCGGATCAATAGGGCAAGCCTTTGACAAGGATGGGAATGTCACTTACATGGGACTTGCCTATGGTAGTGGGGATGCCCATATCAGATCATTTGGTACCCCCTTTGGCAAAGCAGATAACACAGTCCTATCAATTGGTGAATCCTATAATAAAGAGGAACCAAGTATACTTTCTTTTGGTGGGTTCCCGGATGAACGGGGCATTATCTCTGGGGGCAGGACTGCTGCAGACTATGACCAATTATATAATCAACCATCAATTCACGTGTCAACAACAGCTCATGAGAAAGAGTTTGATGCATCAAATTCCAATGCAGCTGTAAGTACTCCTTTGATGGCAACAAAAAAAACTGAATCTGTGTCCAAAAATAAACAAGATATAAAATCAACAAGAAAAGAATCTCCAAACACCTTCCCTACTAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGTGTTCCTGTGAAGTATGTCTCAGTGTCGCGGGAGGAACTTCGTGGAATTATAAAAGGCTCTACCTATCTTTGTGGGTGTCAGTCATGTAACTATTCTAAGGGTCTGAATGCTTTTGAATTTGAAAAGCATGCCGGTTGCAAATCGAAGCATCCAAACAATCACATTTATTTTGAGAATGGGAAGACCATTTATCAAGTAGTACAGGAATTGAGGAGTACCCCTGAAAATTCGTTGTTTGACACAATCCAAACTATTTTTGGTGCACCGATAAATCAGAAAGCATTTCGAATTTGGAAAGAATCATTTCAAGCAGCAACACGCGAGCTTCAGCGTATTTATGGAAAGGAAGGACGCAACATCTAA 1368 0.3947 MVKGSGHVSDREPVFDSPSKVEPKRPHQWVMDATEGDFLPNKKQAIEDANERSSSGFSNVNFTPWENNHNFHSVPSQFMDRLFGSETRPVNFTEKNTYVSGDDSNVRSKMINNHYVNDDSFGLSISHPAGDSEACMNFGGIKKVKVNQVKDSGDVQAPEEHNFDRQSKGSLHQTYNGEVETRSGSIGQAFDKDGNVTYMGLAYGSGDAHIRSFGTPFGKADNTVLSIGESYNKEEPSILSFGGFPDERGIISGGRTAADYDQLYNQPSIHVSTTAHEKEFDASNSNAAVSTPLMATKKTESVSKNKQDIKSTRKESPNTFPTNVRSLISTGMLDGVPVKYVSVSREELRGIIKGSTYLCGCQSCNYSKGLNAFEFEKHAGCKSKHPNNHIYFENGKTIYQVVQELRSTPENSLFDTIQTIFGAPINQKAFRIWKESFQAATRELQRIYGKEGRNI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03365 455 PANTHER AUTOIMMUNE REGULATOR 16 409 - -
Trre8g03365 455 Pfam Tify domain binding domain 350 405 IPR032308 -
Trre8g03365 455 MobiDBLite consensus disorder prediction 297 322 - -
Trre8g03365 455 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03365 Trre-Chr8 35760312 35761983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03365 270 438 PHD Transcription Factor Family AT3G53680 43.182 5.62e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03365 - - tpra:123918512 854.744