Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03278 ATGAATTATTCAAACTATGATGCTGATGAGTTTCAACAAGGTTCTATGGATACCTTGCCCATGGAAGACACTGATTTTTCAGAAACCATAAAGTTCATAACCCAAATCCTTATGGAAGAAAACTTTGACAAGAAACCCTTTTATGATCCACTTAGCTTACAAATCACAGAAAAATCATTCTTTGATGCTCTTTCCCCCAATCAACACCCCTTAGATTTTCATAACTCTGATGAAAGAATCAGCAGCACTAGTGATAGCTCAACAAAACCTCTTTCAACTAGTGTTAGTGATGGACTTGTAGATTTGGATTCTTCTATTACCAATTTGTTAGCACAAAACATTTTTAGTAATGCAGATTCTGTTTCCCAATTCAAGAGAGGTTTTGAAGAAGCCAACAAGTTTCTTCCTCCTCAGCCTCAACTCTTGACTAGTCTAGAATCGTCAAACTTCAATATGGTTGAGGAGAAAGAGAATCCATTTGTGTTGAAAGGTAGAAAGAATCACGAGCGCGAAGAAGATGAAGAAGGGAGGAGAAATAACAAGCAATCGGCTATTGGTGGTGTTGTTGATGAGGATGAGCTATCAGAAATGTTTGATAAAGCTTTACTTAACGTCGAAAATGAGTGCTTGCCGAATGAGAAGCTTCCTTCAGCTAATGGAGCAAAGGCTCGTCCTAAGAAACGTAATAGCAAAAACGAAACGATTGATTTGAGAAATCTTCTGCTTTTGTGCTCACAAGCTTTGTATGCCAATGACAACAGGAATGCTAATGAATTACTGAAGCAGATTAGGCAACATTCTTCGGCCTTTGGAGATGCATCACAGAGGGTGGCACATTACTTTGCTAATGGAATTGAGGCACGCCTTTTAGGCGATGGAACCGGCGCACAAACATTTTATTCCTCGCCGAGCGCCAAGAGGATCACTGCTGCTGAGTTTTTGAAAGCATACCAAGTTCATTTTATTAGTCCTCCATTCAAGAAGTTTGCATATTTGTTTGCAGATAAAATGATTATGAAAGTTGCTAAAAAGGCTGAAACCCTTCATATCATTGATTTTGGTATCCTTTATGGTTTTCAGTGGCCGATGCTTATTAAGTACTTATCAATTAGAGAAGGCGGGCCTCCAAAGTTGAGAATCACTGGGATAGAGTTCCCTTTACCTGGCTTTCGTCCGACTGAAAGAATTGAGGAGACTGGTAGCCGTCTGGCCAATTACTGCAAGCGTTTCAGTGTTCCATTCGAGTACAATTTCATAGCGTCGCGGAACTGGGAAGCAATTCGAGTTGAAGATCTTAAAATTGAAAGCAATGAGGTAATCGCTGTTAACTGTATGATGAGGTTTGAGAATTTACTAGATGAGAGTATTGAAGTGAAAAGTCCTAGAAATGTGGTTCTGCATTTGATTAGGAAGATAAACCCTGATATTTTTACTCTTTCCATTGTTAATGGATCGTATAATTCACCTTTCTTTGCAACGCGGTTTAGGGAGGCATTGTTTCAATTTTCTGCTATTTATGATATGTTGGACACTGTCATACCAAGGGAAAATGAATGGAGGACGATGCTCGAGAGGGAAATCATGGGTAGGGAAGTTATGAATGTTGTAGCTTGTGAAGGTTTAGAGAGAGTTGAGAGGCCTGAGACATATAAAATGTGGCAGGTTAGGAATATTAAGGCTGGTTTCAAGCAGCTTCCATTGGACTCAGAATTAATGGCAAAATTTAGGACAAAGTTAAAGCAGTGGTACCATAGAGATTTTGATTTTGATGAAGACAACAATTGGATGCTTCAAGGTTGGAAAGGCCGTATTTTATATGCTTCAACTTGTTGGGTGCCTGCATAA 1845 0.3924 MNYSNYDADEFQQGSMDTLPMEDTDFSETIKFITQILMEENFDKKPFYDPLSLQITEKSFFDALSPNQHPLDFHNSDERISSTSDSSTKPLSTSVSDGLVDLDSSITNLLAQNIFSNADSVSQFKRGFEEANKFLPPQPQLLTSLESSNFNMVEEKENPFVLKGRKNHEREEDEEGRRNNKQSAIGGVVDEDELSEMFDKALLNVENECLPNEKLPSANGAKARPKKRNSKNETIDLRNLLLLCSQALYANDNRNANELLKQIRQHSSAFGDASQRVAHYFANGIEARLLGDGTGAQTFYSSPSAKRITAAEFLKAYQVHFISPPFKKFAYLFADKMIMKVAKKAETLHIIDFGILYGFQWPMLIKYLSIREGGPPKLRITGIEFPLPGFRPTERIEETGSRLANYCKRFSVPFEYNFIASRNWEAIRVEDLKIESNEVIAVNCMMRFENLLDESIEVKSPRNVVLHLIRKINPDIFTLSIVNGSYNSPFFATRFREALFQFSAIYDMLDTVIPRENEWRTMLEREIMGREVMNVVACEGLERVERPETYKMWQVRNIKAGFKQLPLDSELMAKFRTKLKQWYHRDFDFDEDNNWMLQGWKGRILYASTCWVPA 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03278 614 MobiDBLite consensus disorder prediction 164 184 - -
Trre8g03278 614 MobiDBLite consensus disorder prediction 164 180 - -
Trre8g03278 614 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 171 607 IPR005202 -
Trre8g03278 614 MobiDBLite consensus disorder prediction 71 94 - -
Trre8g03278 614 Pfam GRAS domain family 237 611 IPR005202 -
Trre8g03278 614 ProSiteProfiles GRAS family profile. 228 612 IPR005202 -
Trre8g03278 614 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03278 Trre-Chr8 31567292 31569136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03278 29 614 GRAS Transcription Factor Family AT1G07530 45.785 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre8g03278 GRAS 1.7e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03278 - - tpra:123918580 1086.25