Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03234 ATGATAGGGAGGAACTATGCCTTCATATTTAAGCTAACAATAAATTCTGGAGGGGTTGCTTCCTTTGCCCTTTTCAATGTCCATGGGAGTGATGATGTATCTCTAAAAGAAGCAGCAGCTGTCATAACGATATCTTCATCGAGAATGACAACACAATCCGAATGTCTCAGATATGAATTTGCCAAGTGGTTTGGGAGTCCAAACGCCACAGGCTAG 216 0.4213 MIGRNYAFIFKLTINSGGVASFALFNVHGSDDVSLKEAAAVITISSSRMTTQSECLRYEFAKWFGSPNATG 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03234 71 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 10 65 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03234 Trre-Chr8 30329483 30330319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03234 10 65 Protein tyrosine phosphatase (PTP) family AT5G23720 62.500 7.92e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03234 K14165 - cpap:110822969 80.1073