Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03224 ATGACAGCCGGTGTATTTGTGTTTGCTGCAACCAGTAGACCGGATCTACTGGATGCAGCATTGTTGAGACCGGGTAGGTTAGATCGTCTTCTATTTTGCGACTTTCCATCTTGGCATGAGAGATTGGAAATTCTTACTGTACTTTCTAGAAAGCGAGCAAAGGCATTCAAAAGAAAAGAAATTTACTCGATCGATCATTGTGTTGGTCGTGTTGGAGCTTTGCAATTCCCAACTCTTCTCTTCTATTCCTTTTCGGTGAATCTTTCTGCTAGTTGA 276 0.4203 MTAGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKRAKAFKRKEIYSIDHCVGRVGALQFPTLLFYSFSVNLSAS 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03224 91 Gene3D - 4 35 IPR027417 -
Trre8g03224 91 Gene3D - 36 64 - -
Trre8g03224 91 ProSitePatterns AAA-protein family signature. 5 23 IPR003960 GO:0005524|GO:0016887
Trre8g03224 91 PANTHER AAA-FAMILY ATPASE 4 54 - -
Trre8g03224 91 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 52 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03224 Trre-Chr8 30140399 30150937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03224 4 51 Calmodulin-binding Proteins AT3G56690 56.250 3.58e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03224 K13338 - nnu:104609472 97.8265