Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03211 ATGGATGATGGACACATGCACCACGGCGGCATGGATGGTATGACGATGACACCAGTACCATCACCACCATCATCATCATCATCATCATCATCATCATCTTCTTCTTCATCCAATGGTACTACCATGATGATGGGTCATAAGATGCACGGTATGATACACATGACATTCTTTTGGGGTAAAGACGCTTTGATTCTCTTCGAAAATTGGCCTAATGGTGATACTGGTATGTATGTATTGGCTTTGATAATTGTTTTCGTCATGTCCGTACTCATCGAGTTACTCTCACGGACCCGGTTCATTAAACCCGGTTCAAACTCTGTTGCTTCCGGTTTGGTTCAGACACTTTTGCATGTTCTTAGAGTTGGGTTAGCTTATTTGGTTATGTTGGCACTTATGTCTTTTAATGGTGGTGTTTTCTTGGTTGCTGTTCTTGGTCATGCTCTTGGATTCTTCTTATGTAGCAGTGCTTTCAGAAAACCGCATCATGATGAACCTTATGATCTTCCTCCCTTATCTTGTTAA 522 0.4176 MDDGHMHHGGMDGMTMTPVPSPPSSSSSSSSSSSSSSNGTTMMMGHKMHGMIHMTFFWGKDALILFENWPNGDTGMYVLALIIVFVMSVLIELLSRTRFIKPGSNSVASGLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFFLCSSAFRKPHHDEPYDLPPLSC 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03211 173 Pfam Ctr copper transporter family 108 153 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre8g03211 173 Pfam Ctr copper transporter family 54 96 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre8g03211 173 MobiDBLite consensus disorder prediction 1 39 - -
Trre8g03211 173 MobiDBLite consensus disorder prediction 18 39 - -
Trre8g03211 173 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 43 160 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03211 Trre-Chr8 29958388 29958909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03211 55 173 Inorganic Solute Cotransporters AT5G59030 50.000 4.88e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03211 K14686 - gmx:100306175 205.297