Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03206 ATGGCTTCCATTCCTCTCACCACCACCACCACCCTCCTCCCATCACTCCGCCACCGTTCCTCCCCCTCACTCCGCCACTTCCATTCCAACACCACTCTCAAACCCCTCAAATCACTCCGCCACTCTTCCATTTCCACCTTCTCCCCCCTCCCACTCTCAAACCTCATTTCTCCCAATTCAAAACGCAACACTCTCGTTGTTAAAGCTTCATCAGCTTCCATCACACCAGCTCCAGCTCCAGCTCCGGCTCAGCCATGGCAAGGAGCCGCGATAAAACCACTCTTAGCATCAATAGCAACCGGAGTTATTCTCTGGTTCGTTCCCACTCCCGCAGGTGTATCAAGACAAGCGTGGCAGTTACTCGCGATTTTCTTAGGAACAATCGTTGGAATCATCACACAACCATTACCACTCGGTGCCGTCGCGATTTTAGGTTTAGGAGTTTCTGTTCTCACCAAAACCCTATCCTTTGTAGCTGCATTCTCTGGATTCGGTGATCCAATTCCATGGTTAATTTGTCTCGCATTTTTCTTCGCTAAAGGTTTCATCAAAACTGGATTAGGTAATCGTGTTGCGTATCAATTCGTTTCGCTTTTCGGTAGTTCTTCGTTAGGGTTAGGTTATAGTTTGGTTTTCAGTGAAGCTTTATTAGCACCAGCGATTCCTTCCGTTTCGGCTAGAGCTGGTGGAATTTTTCTTCCATTGGTAAAATCTTTGTGTGTTGCTTGTGGAAGTAATGTTGGTGATGGAACTGAGAATAAGCTTGGATCTTGGTTGATGCTTACTTGTTTTCAGACTTCTTGTATTTCGTCTGCCATGTTTTTGACTGCAATGGCTGCGAATCCGCTTTGTGCTACGCTTACTTTGAATTCAATTAACCAGACAATTGGTTGGTTGGATTGGGCTAAAGCTGCTATTGTGCCTGGTTTGGTGTCGTTGATATTGGTGCCGTTGATTTTGTATGTTATATACCCTCCTACCTTGAAATCTAGTCCTGATGCACCCAAGCTTGCTAGGGAAAAGTTGGAGAAAATGGGACCTATGACAAGTAATGAGAAAATCATGACTGCTACTTTGTTTCTTACGGTGGGACTTTGGGTTTTTGGAGGGGTTCTTAAAGTAGATGCTGTAACTTCTGCCATTCTTGGATTAGCCATACTCCTCATCACAGGGGTTGTAACATGGAAAGAGTGCTTAGCTGAGGGTGTTGCATGGGATACACTCACATGGTTTGCTGCCCTCATTGCAATGGCCGGGTATTTGAACAAATATGGTCTCATCGCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTCTCATGGCAACTATCTTTTGGTATTCTGGTCCTCCTCTACTTCTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTGGGAACTCCACCATTCTTCGGAGCCATGGTGCTGTCCTTCCTCTCCAACCTTATGGGAGGCCTTACTCATTATGGGATTGGGTCAGCTCCAGTGTTTTTCGGTGCCAACTATGTCCCACTTGCCAAATGGTGGGGTTATGGCTTTGTTATTAGTATTGTCAACATTATAATCTGGCTTGGACTCGGGTCTATTTGGTGGAAATTTATTGGCTTGTGGTAA 1671 0.4542 MASIPLTTTTTLLPSLRHRSSPSLRHFHSNTTLKPLKSLRHSSISTFSPLPLSNLISPNSKRNTLVVKASSASITPAPAPAPAQPWQGAAIKPLLASIATGVILWFVPTPAGVSRQAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLSFVAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENKLGSWLMLTCFQTSCISSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLVSLILVPLILYVIYPPTLKSSPDAPKLAREKLEKMGPMTSNEKIMTATLFLTVGLWVFGGVLKVDAVTSAILGLAILLITGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLIAWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFVISIVNIIIWLGLGSIWWKFIGLW 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03206 556 NCBIfam DASS family sodium-coupled anion symporter 108 550 IPR001898 GO:0016020|GO:0022857|GO:0055085
Trre8g03206 556 Pfam Sodium:sulfate symporter transmembrane region 93 556 IPR001898 GO:0016020|GO:0022857|GO:0055085
Trre8g03206 556 CDD ArsB_NhaD_permease 128 550 - -
Trre8g03206 556 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 62 556 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03206 Trre-Chr8 29753914 29756974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03206 1 555 Antiporters AT5G12860 78.826 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03206 - - gmx:100796365 878.626