Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03200 ATGGGAAGTTTGGATAGAGACCTAAAGAATATGAGGGAGTATTTTAGGAGTGGAAAAACAAAGGAAGCTTCATGGAGAGAATCACAGCTAAAAGGATTACTTAGTTTCCTAATTGAAAAAGAGAATGATATCTTCAAGGCACTCATGCAAGATTTAGGGAAACATCGTATTGAAGCTTTTAGAGATGAGATAGGAACTTTAGTGAAGACCTTAAATCTCGCATTAAAGTCTCTGAAAGATTGGATGTCAAGCAAGAAGGCTCCACTACCAGCAATAGCATTGCTTTCAAGTGCAGAAATTATCCATGAACCTCTTGGTCTTGTCCTCATTATTTCATCTTGGAATTTCCCATTTGGAGTGTCATTGGAGCCACTAATAGGAGCAATAACTGCTGGAAACACAGCAGTGTTAAAACCTTCGGAGTTGTCCCCTTCATGTTCCTCTTTACTTGCTTCTGGCATTGCAACTTACTTGGACAATAAAGCCATTAAGGTTATAGAAGGGGGGCCAGAGGAATCAGAACAATTGTTACAACAAAGATGGGACAAAATCTTTTTTACAGGTAGTGGACGAGTGGGGCGCATTGTGATGTCTGCAGCTGCAAAACATTTGACCCCTGTAACACTGGAGTTGGGTGGAAAATGCCCTGCTGTTGTTGACTCCCTTACATCTTCTTGGGATTTAGAGGTGACTGTGAAGCGGATTATTGTGGGAAAATATGGAACTTGTGCTGGTCAAGCATGCATAGCAATTGACTATGTCCTTGTGGAAAAGAGTTACTATCCAAAATTGGTTGAATTGATGAAGGTGTGGATCAAGAAAATGTTTGGAGACAACCCAAAACATTCCAACACTATAGCAAGGATAGTTAATAAACAACACTTAAATAGATTGAAGAAACTTCTTACTGATAAAAAGGTTAAAGAATCTGTGATTTATGGTGGCTCAGTGGATGAAGAAAACTTATTTATTGAGCCAACAATCTTGGTGGATCCACCACTTGATGCAACAATAATGATAGATGAAATTTTTGGTCCATTACTTCCAATTATAACTGTTGATAAGATTGAGGACAGTATTGAATTCATAAGCTCCAGGCCTAAGCCTCTAGCCCTTTATGTTTTCTCCAAAAACAAAACACTGCAGAACAGAATGATATCAGAAACATCATCTGGCAGTGTTACTTTCAACGACGCAATTCTACAATATGCAGCAGATTCTCTACCATTTGGAGGAGTAGGTGCAAGTGGGTTTGGCATGTACCATGGAAAATTCTCCTTTGACACCTTCAGTCACCAGAAGGCAATTGTTAGAAGAAGTTTCTTAACTGATTTTTGGTATAGATATCCACCATGGACAACAAATAAGTTTCAACTACTTGAGGTCTCTTACAATTATGATTATCTTGGATTGATCCTTGTTATTCTTGGATTAAAGAGACCTTCGAAACGCCAGATCATACCTTGTTAG 1470 0.3864 MGSLDRDLKNMREYFRSGKTKEASWRESQLKGLLSFLIEKENDIFKALMQDLGKHRIEAFRDEIGTLVKTLNLALKSLKDWMSSKKAPLPAIALLSSAEIIHEPLGLVLIISSWNFPFGVSLEPLIGAITAGNTAVLKPSELSPSCSSLLASGIATYLDNKAIKVIEGGPEESEQLLQQRWDKIFFTGSGRVGRIVMSAAAKHLTPVTLELGGKCPAVVDSLTSSWDLEVTVKRIIVGKYGTCAGQACIAIDYVLVEKSYYPKLVELMKVWIKKMFGDNPKHSNTIARIVNKQHLNRLKKLLTDKKVKESVIYGGSVDEENLFIEPTILVDPPLDATIMIDEIFGPLLPIITVDKIEDSIEFISSRPKPLALYVFSKNKTLQNRMISETSSGSVTFNDAILQYAADSLPFGGVGASGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTTNKFQLLEVSYNYDYLGLILVILGLKRPSKRQIIPC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03200 489 FunFam Aldehyde dehydrogenase 12 216 - -
Trre8g03200 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620
Trre8g03200 489 PANTHER ALDEHYDE DEHYDROGENASE 3 471 IPR012394 GO:0006081
Trre8g03200 489 Pfam Aldehyde dehydrogenase family 7 436 IPR015590 GO:0016491
Trre8g03200 489 FunFam Aldehyde dehydrogenase 213 416 - -
Trre8g03200 489 SUPERFAMILY ALDH-like 5 453 IPR016161 GO:0016491
Trre8g03200 489 PIRSF ALDH 3 472 IPR012394 GO:0006081
Trre8g03200 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03200 Trre-Chr8 29626106 29631500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03200 3 480 Aldehyde Dehydrogenase Gene Family AT4G36250 54.603 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03200 K00128 - gmx:100817701 787.334