Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre8g03091 | ATGGGGCATAAAAAGAAGCGTGGAGGAGGAAGTGGAGGAAGAAGAAACAAAGCAAGAACACCTTCCAAAGATCACACTTCTCCGTTCAGTCACGATGATTATAACGAACAACTCTCCGAAGAGATTACTGCACTATGTTCGATTTTTCAAGAGGATTGCGAATTTGTTCCTGGTTCGCCTCCTCAAGTAGTTATTAAGCTAAGGCCTTACTCGAATGACATGGGTTATGAGGATGTAGATGTTTCTGCTGTTCTTATTGTTAGGTGCTTGCCTGGGTACCCCTTCAAGTGTCCCAAGTTGCAGATTACTCCTGAGATGGGTTTATCAGAAACTGATGCTAATAAACTTTTGTCTCTCCTCCTTGATCAGGCTAGTTTAAACGCCAGGGAGGGACGAGTAATGATCTTCAATTTAGTTGAGGCTGCTCAAGAATTTCTGTCTAGAATTGAGCCTATTGCCAAACCAACTGAATCCAAGTTTTTGCACGCAACTACGGAAGGCATTGAAGAATTGTGTCTCAAGGATGTGACATCTTCAAATAAGAATAGATCTTTTGTTTATGGTTTCATCGACCTTTTCAGTGGCTATGGGGAGTCCTGGAATTGGAGTTTTGGAATTGATGAAACTGCTGTAAAAAGTTCTTCTCTTCCTTCCTCTAAGTTAGATGCCTCCAAGCCACGAATAGAAGCCCGTGAAAAGAAATCTGATAGCAAGGAAAACCCGTCCATATTGCAAGAACTTCCTGCCAAATTAGATACTGTTGGAGAAGTTAGTGAAGACAGTAACAATTGCCTATCTTTGACTCGTTCAAGTAGTTCAAGTAGATCTCTGATGGATGGTTCTGATTCTGTAGGGGACGAGAATGAAGGTGAGAAAGAGTATTTTATTGTAGATGAGTATACAACAGAAGATAACAAAGGCATGTCAGGAAGTGAGTCTACAGAGTCTCTTTCTTCTGCATCCTCGCCTCATCACCAAGAAACATCTCAAACAATAGAGAAGGATCTAATAATGGTTCACATGCTTCGCCTTGTTTGTGCCTCTAAAGGTACCTTGGCCGACTCTTTGCCGCAATTAGCAACAGAGCTGTACAATTTAGGGATCTTTTCTGACTCAGCACGTGATATGGCATCAAAACCGCCTTCCCTTTTCAACAAAACCTTTGATCATATCTTCAAGAAACACCTGGCATCATCTAGAATATCTCAATTTTGGACACCTTCTAATGCTGGAGACTCTAATACAGTTCACCATAGTTCTCGATATTTAAATGATTTTGAGGAGCTACGACCTCTTGGTCATGGTGGTTTTGGCCACGTTGTGTTGTGCAAAAATAAACTTGATGGAAGGCAGTATGCAATGAAAAAAATTCGCCTTAAGGACAAAAGCATGCCTGACCGGATATTAAGGGAGGTTGCTACACTTTCTCGATTACAACATCAACATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTACTGATTCTTATGGTGATTATGCTGGGGATTCAAGGACTCCAGCAAGTTCTACTTTCAGCTACAATGGGACAAGGTCCAATGATGGTGTTGGGCGTGAGAATCAACTTGAATCAACATATCTTTATATACAAATGGAGTATTGTCCCATGACTCTTCGCCAGATGTTTGAATCATATAATCATTTTGACAAAGAATTGGCATGGCATTTGTTTCGCCAAATAGTAGAAGGCTTGGCACATATACATGGACAAGGAATAATTCATCGGGACTTGACACCAAATAACATATTCTTTGATGCTCGTAATGATATTAAAATCGGTGACTTTGGTCTTGCCAAGTTCTTGAAGTTGGAGCAGCTGGATCAAGATCTTGCACATCCTGATACAACTGGACTTTCCATTGATGGCACTGGACAAGTTGGGACATATTTTTATACAGCTCCTGAAATTGAGCAAGGGTGGCCTAAGATTGATGAAAAGGCTGACATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCATCCATTTGGGACCGCAATGGAGAGACACGTTGTTTTATCCGATCTAAAGCAAAAAGGGGAACTTCCACCTGCTTGGGTTGCCGAGTTTCCAGAACAGGAATCTTTGCTGCGGCAGTTATTGTCGCCAGGTCCCATAGATCGCCCATCTGCCACTGAACTTCTACACAATGCATTTCCTCCACGAATGGAGTCTGAATTGTTGGACGATATCTTGCGAACAATGCAGAAATCAGAGGATAGAAGCATTTACGATAAAGTTTTAAATGCTATCTTTGATGAAGAGATGTTAAGCACAAAACACATTCATCAGGTTGGCAGATTGGGGTCAGTTGGAGATAGTAGTTCATCAATTCAGCACACAGATCTTGTAACTGAGGTTCGAGATTATGTTGTAGAAGTCAACAAGGAAATTTTCAGGCAGCATTGTGCTAAACACCTAGAAATATCACCAGTGCAATTATTGGATGATTGTCCACAATTTAATAGAAACGCAGTTAAACTTTTGACTCAAGGAGGAAACATGCTTGAACTCTCCCATGAGCTGCGTTTGCCGTTTGTGAACTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATATGTCTACAGAAGAGCAGTTGGGCATTCATCACCAAACCGCTACCTTCAGGGAGATTTTGACATAATTGGTGGTACTTCAGCATTGACAGAGGCAGAGGTCATAAAGGTCACGAAGGACATAGTCACTTGTTTTTTCCATGAAGACTCGTGTGACATTCATCTAAACCACGCTGACCTCCTCGGTGCAATTTGGTCATGGACTGGAATCAAGGTAGAACACAGAGTTAAAGTAGCAGAGCTTCTTTCAATGATGGGTTCTTTGCGTCCTCAATCCTCAGAAAGGAAATCAAAATGGGTAGTGATAAGGCGGCAGCTTTTGCAGGAACTGGGATTAGATGAAGCTATGGTAAATAGGTTGCAGACTGTAGGTCTGCGATTCTGTGGATCTGCAGATCAGGCACTTCCCAGACTAAGAGGAGCTCTACCATCTGATAAGCGTACCTTCAAGGCACTTGATGAATTGTCTGAGCTTGCGAATCTCTTGAGAATTTGGAGGATTGACAAAAATGTATATATAGATGCATTAATGGCACCAAACGAAAGTTATCATAGAGATTTGTTTTTTCAGGTATACTTAAGGAAGGAGAACAGTTCTGGATCACTCTCTGAAGGAGTCTTGTTAGCTGTTGGTGGTCGATATGACAATTTGCTTCATCAATTGAGGAGTAGCGACTATAAAGGAAATCCTCCCACTGGTATGGGAACTAGCCTTGCACTAGAGACAATAATTCAGAATTGTCCTGTAGATTTTAAGCCCAGTCGAAATGAAGCCAGCATCAGTATTCTTGTGTGCTCAAGAGGAGGAGGTGGTCTGTTGGTGGAGCGCATGGAACTAGTTGCTGAATTGTGGCAGGAGAACTTTAAGGCCGAATTTGTTCCTGTCCCTGATCCAAGTCTTACAGAGCAGTATGAGTATGCTAATGAACATGATATCAAATGTCTCGTTATTATTACAGATGCAAGTTTCTCCCTGACAGATACAGTTAAGGTTCGACATCTTGAACTTAAGAAGGAGAAAAATGTTGAGAGAGAGAACCTAGTCAAGTTTCTATCGGATGCTATGGCAACACAATTTAGAAACCCCTACATATGGATCTGA | 3720 | 0.414 | MGHKKKRGGGSGGRRNKARTPSKDHTSPFSHDDYNEQLSEEITALCSIFQEDCEFVPGSPPQVVIKLRPYSNDMGYEDVDVSAVLIVRCLPGYPFKCPKLQITPEMGLSETDANKLLSLLLDQASLNAREGRVMIFNLVEAAQEFLSRIEPIAKPTESKFLHATTEGIEELCLKDVTSSNKNRSFVYGFIDLFSGYGESWNWSFGIDETAVKSSSLPSSKLDASKPRIEAREKKSDSKENPSILQELPAKLDTVGEVSEDSNNCLSLTRSSSSSRSLMDGSDSVGDENEGEKEYFIVDEYTTEDNKGMSGSESTESLSSASSPHHQETSQTIEKDLIMVHMLRLVCASKGTLADSLPQLATELYNLGIFSDSARDMASKPPSLFNKTFDHIFKKHLASSRISQFWTPSNAGDSNTVHHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAMKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVTDSYGDYAGDSRTPASSTFSYNGTRSNDGVGRENQLESTYLYIQMEYCPMTLRQMFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDLAHPDTTGLSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKGELPPAWVAEFPEQESLLRQLLSPGPIDRPSATELLHNAFPPRMESELLDDILRTMQKSEDRSIYDKVLNAIFDEEMLSTKHIHQVGRLGSVGDSSSSIQHTDLVTEVRDYVVEVNKEIFRQHCAKHLEISPVQLLDDCPQFNRNAVKLLTQGGNMLELSHELRLPFVNWIISNQKSSFKRYEISYVYRRAVGHSSPNRYLQGDFDIIGGTSALTEAEVIKVTKDIVTCFFHEDSCDIHLNHADLLGAIWSWTGIKVEHRVKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELGLDEAMVNRLQTVGLRFCGSADQALPRLRGALPSDKRTFKALDELSELANLLRIWRIDKNVYIDALMAPNESYHRDLFFQVYLRKENSSGSLSEGVLLAVGGRYDNLLHQLRSSDYKGNPPTGMGTSLALETIIQNCPVDFKPSRNEASISILVCSRGGGGLLVERMELVAELWQENFKAEFVPVPDPSLTEQYEYANEHDIKCLVIITDASFSLTDTVKVRHLELKKEKNVERENLVKFLSDAMATQFRNPYIWI | 1239 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre8g03091 | 1239 | FunFam | eIF-2-alpha kinase GCN2 | 29 | 155 | - | - | |
| Trre8g03091 | 1239 | Gene3D | Bira Bifunctional Protein; Domain 2 | 789 | 1122 | IPR045864 | - | |
| Trre8g03091 | 1239 | SUPERFAMILY | UBC-like | 33 | 146 | IPR016135 | - | |
| Trre8g03091 | 1239 | PANTHER | HISTIDYL-TRNA SYNTHETASE | 787 | 1233 | - | - | |
| Trre8g03091 | 1239 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
| Trre8g03091 | 1239 | Pfam | Histidyl-tRNA synthetase | 877 | 1116 | IPR041715 | - | |
| Trre8g03091 | 1239 | MobiDBLite | consensus disorder prediction | 285 | 300 | - | - | |
| Trre8g03091 | 1239 | SUPERFAMILY | Class II aaRS ABD-related | 1132 | 1229 | - | - | |
| Trre8g03091 | 1239 | CDD | STKc_EIF2AK4_GCN2_rpt2 | 419 | 725 | - | - | |
| Trre8g03091 | 1239 | FunFam | eIF-2-alpha kinase GCN2 | 414 | 542 | - | - |
Showing 1 to 10 of 33 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre8g03091 | K16196 | - | gmx:100797996 | 2019.2 |
Showing 1 to 1 of 1 entries