Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03086 ATGGCAGTAAGAGATGCTGTCATGGTTGAAGTTGGTAGCATACATGATGAAAACAGAGAAGAAGAAAGTTCTGCTGAACCAACTTATAAACAAGACCAAGATGATAACGTGACTCAAGATTCTTCTGGAGGAGCGTTAACAATACCCTCAGCAATTCCCACACTACCAGACGCTTCTGCTGATGAGCCCTATGTGGGTCAGGAGTTCGAGTCAGAAGCAGCAGCACATGCCTTTTATAATGCATACGCAGCTGAGGTTGGTTTCATCATACGCGTAAGCAAACTCTCACGATCAAGGCGTGACGGAACTGCTATTGGACGCGCTCTTGTTTGCAACAAAGAGGGTTACCGAATGCCTGATAAGCGCGAAAAGATCGTAAGACAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTATGATGAGGAAAGTTAATTCTGGTAAATGGGTTATTACAAAGTTTGTAAAGGAGCACACACACCCCTTGAACCCCGGAAGTAATAGAAGGGATTGCATGTTTGAACAATATCCGTCTCAGAACGAACATGATAAAATTCGCGAACTATCTCAGCAGTTGGCAATAGAGAAGAAGCGATCAGTGACTTATAAAAGACAACTTGAGGTGATATTTGATTATATCGAGGAGCATAATGTGACCCTTTCACACAAAATACAGCACATAGTAGACAGTGTGAAGCAGATGGAACCTAAAGAAGAAGAAGAAGATAATCATTGA 738 0.4268 MAVRDAVMVEVGSIHDENREEESSAEPTYKQDQDDNVTQDSSGGALTIPSAIPTLPDASADEPYVGQEFESEAAAHAFYNAYAAEVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMMRKVNSGKWVITKFVKEHTHPLNPGSNRRDCMFEQYPSQNEHDKIRELSQQLAIEKKRSVTYKRQLEVIFDYIEEHNVTLSHKIQHIVDSVKQMEPKEEEEDNH 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03086 245 MobiDBLite consensus disorder prediction 30 48 - -
Trre8g03086 245 MobiDBLite consensus disorder prediction 10 29 - -
Trre8g03086 245 Pfam FAR1 DNA-binding domain 78 165 IPR004330 -
Trre8g03086 245 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 235 - -
Trre8g03086 245 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03086 Trre-Chr8 27488197 27490657 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre8g03086 FAR1 1.2e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03086 - - gmx:100806900 353.984