Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03035 ATGCCTAGCATGGCTTCCCCTCTCCAACTTCCACTTTATTCTACTTGTGGTAAAATTCCTTCTCTTACTGCTCCTCAAACCATTTCTGTTAGAAGATTTGTTCTTAAAGTGAAGTCCTCAGAAACAAGGGAATGCACTGCTAATGTTAATGATAATGCTAATTCACGTAGAGACTTTCTTGGATTAACATTAGGAGTCTCTACACTCTTTATCCATTCATTTGATGCTGCCAATGGAGCTGGTTTGCCACCAGAAGAAAAACCAAAATTATGCGACGACACTTGTGAGAAAGAGCTTGAAAATGTACCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTATAGTTGGGCAAGGCCCTAGTCCACCAGTTGGATTTCAGGTTGCTGCTAATTATGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGCCAGCTTTATATTTTTCGCGTTGGATCGGGTCAGGTGATAAAAGGACTTGATGAAGGTCTTTTGAGCATGAAAGTAGGAGGGAAACGTCGGCTGTACATACCTGGACCATTGGCATTCCCAAAAGGTCTTAATTCTGCTCCAGGAAGACCAAGAGTGGCTCCAAACAGTCCGGTTGTATTTGATGTAAGTTTGGAATATGTACCAGGACTTGAAGTGGATGAGGAATAA 681 0.4097 MPSMASPLQLPLYSTCGKIPSLTAPQTISVRRFVLKVKSSETRECTANVNDNANSRRDFLGLTLGVSTLFIHSFDAANGAGLPPEEKPKLCDDTCEKELENVPMVTTESGLQYKDIIVGQGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGLLSMKVGGKRRLYIPGPLAFPKGLNSAPGRPRVAPNSPVVFDVSLEYVPGLEVDEE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03035 226 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 127 219 IPR001179 GO:0003755
Trre8g03035 226 FunFam Peptidylprolyl isomerase 99 217 - -
Trre8g03035 226 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 80 219 - -
Trre8g03035 226 Gene3D - 100 216 IPR046357 GO:0003755
Trre8g03035 226 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 127 215 IPR001179 GO:0003755
Trre8g03035 226 SUPERFAMILY FKBP-like 91 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03035 Trre-Chr8 26934715 26941031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03035 108 215 Calmodulin-binding Proteins AT3G25230 35.780 9.66e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03035 K01802 - gmx:100818743 365.54