Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03027 ATGGCTCACAAAGGCAACAACAACAAGGAAATAGAAGAAGATGAACGAACGTTTCGACGCCTGAAGAGAGAACGGATCAAAGCCAATGAAAATGTTGCGGAGGAGTTTGACTCTTCTAGCGGCATAATTAATATTTGTTCTGAGTTCCTCAAACTCAAGTCTCTCATCAATGAGAAAAAGGATGATTTGATGAACATTGATTCTGACAGGTTTTATTCAATCCTTCACGAGTTCAACAAGTTACATGAACAAGTCATGAGACCTCGAGAGCATGTTGTTGACGCTGAAGCACTTGTCGATCTCACTCACACTTTGGCCGAATCCGTTAAGTCGCAGGTCAATGAAGGTGTTACTCCTTCTCAGTTTGTTTCTTCTTTGCTCAAACACTATGCCCACCCACCCAACACTTCAATCGACTGGAATAACCTCGGAATTGTTGTTTCCCCCATTTTCCTCACGGCTCATGGCTCTTCTACCATGCTTGGTCCCATGGAAAATCAGTTGAAACAACACAAAACGTACGTGTCTAGAAAGCGAGCTCCTCTCACAACTACAACTTCTAGGCCGGAACAACTGGATGATGTTGTTGGAGGGGAAAAAACAGATACTGACAAAAACATGTTAACCATGTTTAACATATTAAGGGAAAAGAAAAAGGTCCAACTTGAACACCTGATTTTGAACAGATTTTCTTTTGGTCAGACAGTGGAAAACTTGTTTGCCCTTTCATTTTTAGTGAAAGATGGTCGTGCTGAGATCGTTCGCACTATGTTTTACCAAAAAATGCTCCGACTGCTAACTCTGAGGAAGTTATATATTGTGGAGGAATCGCCTGAATGCAATGATGAAAATGCTTCTAGAGCTACTGCAATCCGAAGGTGTAGGCGTAAACTTCCTTAA 900 0.4156 MAHKGNNNKEIEEDERTFRRLKRERIKANENVAEEFDSSSGIINICSEFLKLKSLINEKKDDLMNIDSDRFYSILHEFNKLHEQVMRPREHVVDAEALVDLTHTLAESVKSQVNEGVTPSQFVSSLLKHYAHPPNTSIDWNNLGIVVSPIFLTAHGSSTMLGPMENQLKQHKTYVSRKRAPLTTTTSRPEQLDDVVGGEKTDTDKNMLTMFNILREKKKVQLEHLILNRFSFGQTVENLFALSFLVKDGRAEIVRTMFYQKMLRLLTLRKLYIVEESPECNDENASRATAIRRCRRKLP 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03027 299 Coils Coil 4 31 - -
Trre8g03027 299 MobiDBLite consensus disorder prediction 177 199 - -
Trre8g03027 299 MobiDBLite consensus disorder prediction 177 191 - -
Trre8g03027 299 Pfam Nse4 C-terminal 220 269 IPR014854 -
Trre8g03027 299 PANTHER UNCHARACTERIZED 22 253 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03027 Trre-Chr8 26832087 26833192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03027 47 254 Non-SMC Element family AT1G51130 51.152 2.07e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03027 K22825 - gmx:100792117 276.174