Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03026 ATGGCTCACAAAGGCAACAACAACAAGGAAATAGAAGAAGATGAACGAACGTTTCGACGCCTGAAGAGAGAACGGATCAAAGCCAATGAAAATGTTGCGGAGGAGTTTGACTCTTCTAGCGGCATAATTAATATTTGTTCTGAGTTCCTCAAACTCAAGTCTCTCATCAATGAGAAAAAGGATGATTTGATGAACATTGATTCTGACAGGTTTTATTCAATCCTTCACGAGTTCAACAAGTTACATGAACAAGTCATGAGACCTCGAGAGCATGTTGTTGACGCTGAAGCACTTGTCGATCTCACTCACACTTTGGCCGAATCCGTTAAGTCGCAGGTCAATGAAGGTGTTACTCCTTCTCAGTTTGTTTCTTCTTTGCTCAAACACTATGCCCACCCACCCAACACTTCAATCGACTGGAATAACCTCGGAATTGTTGTTTCCCCCATTTTCCTCACGGCTCATGGCTCTTCTACCATGCTTGGTCCCATGGAAAATCAGTTGAAACAACACAAAACGAGGAAGTTATATATTGTGGAGGAATCGCCTGAATGCAATGATGAAAATGCTTCTAGAGCTACTGCAATCCGAAGGTGTAGGCGTAAACTTCCTTAA 615 0.4244 MAHKGNNNKEIEEDERTFRRLKRERIKANENVAEEFDSSSGIINICSEFLKLKSLINEKKDDLMNIDSDRFYSILHEFNKLHEQVMRPREHVVDAEALVDLTHTLAESVKSQVNEGVTPSQFVSSLLKHYAHPPNTSIDWNNLGIVVSPIFLTAHGSSTMLGPMENQLKQHKTRKLYIVEESPECNDENASRATAIRRCRRKLP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03026 204 Coils Coil 4 31 - -
Trre8g03026 204 PANTHER UNCHARACTERIZED 21 176 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03026 Trre-Chr8 26832087 26833192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03026 47 172 Non-SMC Element family AT1G51130 44.444 6.87e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03026 K22825 - mtr:25479921 220.705