Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03003 ATGGCAACATCATCATATGAACCTTCCACCACCAACCTCCCTCTCAAACCAATCCCAGGAAGCTACGGCCTTCCGGTTATCGGAGCCCTCCACGACAGACACGACTATTTCTACAACCAAGGCCGCGACAAATACTTCGCATCAAGAATCGAAAAATACAACTCAACTGTCCTAAGACTCAATATGCCACCTGGTGGCTTCATCGCACCAGACCCAAAAGTCATCGCTCTTCTCGACGGTGTTTCCTTCCCCGTCCTCTTCGACAACGCTAAAGTCGAAAAAAAGGACGTCCTCGACGGTACTTTCATGCCATCCACTAATTTCTTCGGAGGTTATCGCACTTGCGCTTTTCTAGACACCACTGAACCTTCCCATCCTCTCCTCAAACGCTTCATTTCCCATATCCTATCTTCCAAACACGACACTTTCATTCCTCTTTTTCAAACCAACCTCTCCGAACACTTTGCCGATCTCGAGAAAGAACTCGCCGGAAAACATAATAAAGCAAGTTTCAACTCCTCCATTGGATCCATCACCTTTAACTTTCTCTTCAAACTTATCACTGATAAATTACCAACCGAGACAAAAATCGGTGACTCCGGTCCCACTCTTGTTCAAACATGGCTTGCAGCTCAGCTTGCTCCGTTAGCCACCGCTGGTCTTCCGAAAATCTTCAACTACCTTGAAGATATTCTCATCAGAACTGTTCCGATCCCGGCATGGACAGTGAAATCAAGTTATAACAAACTCTATGAAGGTTTAATGGAAGCAGGAACAACTGTGTTAGATGAAGCTGAGAAAATGGGTATATCAAGAGAAGAAGCTTGTCATAATCTTGTTTTCACTTTAGGGTTCAACGCTTTTGGTGGGTTAACGAACCAGTTTCCGATTCTGATCAAATGGGTCGGGTTGGGTGGTGAAGAGTTGCATAAGAAACTCGCTAATGAAATCAGGACCGTTGTTAATGAACAAGGTGGTGTTAGTTTTAGTTCGTTGGATAAGTTGACTTTGACTAAATCAACAGTGTACGAAGCTTTGAGAATTGAACCAGCTGTACCGTATCAATACGCTAGAGCGAGGGAGGATCTGGTGGTGTCAAGTCACGATGCATCTTTTGAGATTAAGAAAGGTGAAATGATCTTTGGATATCAACCGTTCGCTACTAAAGATCCAAAGATTTTTGAGAATCCCGAGGATTTTATTGCGGAGAGGTTTATTGGTGACGGAGAGAAGTTGTTGAAACACGTGTTCTGGTCCAATGGACGTGAGACTGATGAGGCTACACCCGATAATAAAATATGTCCGGCTAAGAATCTGGTGGTGCTCTTGTGTAGATTGTATTTGGTGGAATTCTTCTTGAAATATGATACATTTACCTTTGATTTTAAACCGTCTGTTTTGGGTCCCACTATAACTATCAAGTCACTCACTAAAGCCTCCTCCACCGTCTGA 1452 0.4366 MATSSYEPSTTNLPLKPIPGSYGLPVIGALHDRHDYFYNQGRDKYFASRIEKYNSTVLRLNMPPGGFIAPDPKVIALLDGVSFPVLFDNAKVEKKDVLDGTFMPSTNFFGGYRTCAFLDTTEPSHPLLKRFISHILSSKHDTFIPLFQTNLSEHFADLEKELAGKHNKASFNSSIGSITFNFLFKLITDKLPTETKIGDSGPTLVQTWLAAQLAPLATAGLPKIFNYLEDILIRTVPIPAWTVKSSYNKLYEGLMEAGTTVLDEAEKMGISREEACHNLVFTLGFNAFGGLTNQFPILIKWVGLGGEELHKKLANEIRTVVNEQGGVSFSSLDKLTLTKSTVYEALRIEPAVPYQYARAREDLVVSSHDASFEIKKGEMIFGYQPFATKDPKIFENPEDFIAERFIGDGEKLLKHVFWSNGRETDEATPDNKICPAKNLVVLLCRLYLVEFFLKYDTFTFDFKPSVLGPTITIKSLTKASSTV 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03003 483 SUPERFAMILY Cytochrome P450 13 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03003 483 FunFam Allene oxide synthase, chloroplastic 13 481 - -
Trre8g03003 483 CDD CYP74 48 474 - -
Trre8g03003 483 Pfam Cytochrome P450 308 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03003 483 Gene3D Cytochrome P450 9 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03003 483 PANTHER CYTOCHROME P450 26 13 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03003 Trre-Chr8 26581265 26582716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03003 10 480 Cytochrome P450 AT5G42650 49.683 1.46e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03003 K01723 - gmx:100810890 755.362