Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g03002 ATGGCAACATCATCATATGAACCCTCCTCCACGAACCTCCCTCTCAAACCAATACCAGGAAGCTACGGCCTCCCCATCATCGGAGTTCTACACGACAGACAAGACTATTTCTACAACCAAGGCCGCGACAAATACTTCGCAACCAGAGTCGAAAAATACAACTCCACAGTCCTAAGACTCAACATGCCACCTGGTGGCTTCATTGCACCAGACCCAAAAGTCATCGCTCTTCTCGACGGCATCTCCTTCCCCATCCTTTTCGACAATGCTAAAGTCGAAAAAAAGGACGTCTTCGAAGGCACTTACATGCCTTCCACCGAGTTTTTCGGCGGATACCGGACCTGTGCTTTTCAAGATACCGCTGAACCTTCTCATAACCTTCTCAAACGCTTCATCTTCTACATCCTATCGTCCAAACACAACAGCTCCCTCCCTCTTTTTAGCTCCAACCTATCCGAACACTTCAATGATCTTGATAAACAATTAGCCGAAAAACATACAGCAAATTTCAACTTCTCCGTCGACGCCTTCTCCTTCAACTTCTTCTTCAATCTCATCACAGACAAATCCCCAACCGAAACCAAAATTGGCAACTGCGGTCCCATCCTTTGTCAAACATGGCTTGCAGCTCAGCTTGCTCCGTTAGGCACCGCCGGTCTTCCCAAAATCTTCAACTACCTTGAAGATGTTCTCCTCAGAACCGTTCCAGTCCCGGCATGCACAGTGAAATCAAGTTACAACAAACTCTACGAAGGTTTAATGGAAGCAGGAACAACTGTGTTAGATGAAGCTGAAAGAATGGGTATAACAAGAGAAGAAGCTTGTCATAATCTTGCTTTTGTTTTAGGGTTCAATGCTTTTGGTGGATTATCAAACCAGTTTCCAATTCTGATTAAATGGGTCGGGTTAGGTGGACCGGGTTTACATAAAAAACTCGCCGATGAAATCAGGGCCGTTGTTAAGAAAGAAGGCGGGGTTACTTTCAATTCGTTGGATAAGATGACTTTGACTAAATCTGTGGTGTATGAAGTTTTGAGAATTGAACCAACTGTACCGTATCAATACGCTAGAGCGAGGGAGGATCTGGTTGTGTCGAGTCACGATGCGTCTTTTAAGATTAAGAAAGGTGAGATGATCTTTGGATATCAACCGTTCGCTACTAAAGATCCAAAGATTTTTGAGAATCCCGAGGATTTTGTTGCGGAGAGGTTTATTGGTGATGGAGAGAAGTTGTTGAAACACGTGTACTGGTCAAATGGACGTGAGATTGATTATGCTACACCTGATAATAAAATATGTCCAGCTAAGAATCTGGTGGTGCTCTGGTGTAGGTTGTATTTGGTGGAATTCTTCTTGCGTTATGATACTTTTACCTTTGATTTTAAACCATTTGGTGTGAGTCATAGGATTACTATCAAGTCGCTTATGAAGTCCAAATAG 1440 0.4354 MATSSYEPSSTNLPLKPIPGSYGLPIIGVLHDRQDYFYNQGRDKYFATRVEKYNSTVLRLNMPPGGFIAPDPKVIALLDGISFPILFDNAKVEKKDVFEGTYMPSTEFFGGYRTCAFQDTAEPSHNLLKRFIFYILSSKHNSSLPLFSSNLSEHFNDLDKQLAEKHTANFNFSVDAFSFNFFFNLITDKSPTETKIGNCGPILCQTWLAAQLAPLGTAGLPKIFNYLEDVLLRTVPVPACTVKSSYNKLYEGLMEAGTTVLDEAERMGITREEACHNLAFVLGFNAFGGLSNQFPILIKWVGLGGPGLHKKLADEIRAVVKKEGGVTFNSLDKMTLTKSVVYEVLRIEPTVPYQYARAREDLVVSSHDASFKIKKGEMIFGYQPFATKDPKIFENPEDFVAERFIGDGEKLLKHVYWSNGREIDYATPDNKICPAKNLVVLWCRLYLVEFFLRYDTFTFDFKPFGVSHRITIKSLMKSK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g03002 479 Gene3D Cytochrome P450 9 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03002 479 FunFam Allene oxide synthase, chloroplastic 13 479 - -
Trre8g03002 479 PANTHER CYTOCHROME P450 26 13 455 - -
Trre8g03002 479 CDD CYP74 48 473 - -
Trre8g03002 479 Pfam Cytochrome P450 306 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g03002 479 SUPERFAMILY Cytochrome P450 14 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g03002 Trre-Chr8 26563899 26571102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g03002 3 478 Cytochrome P450 AT5G42650 48.745 6.85e-161 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g03002 K01723 - gmx:100810890 681.404