Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre8g02906 | ATGATGAAGGTGCTAGCAATACAAGCTATGTATCACTTGGGAGGTTACTCTATTCTCTTGGGAGGTTACTTTAGGGAGAGAAAAATTCTGCAAACAATCCAAGGCTTTCAGACTTTGCCATCATCGGCATTTATAGAACCGCTCCCTTTGATTGACACTGTAGCTCAAATTTTAGGAAAAGATGTGTACTCAAAGCCAATTACAGATGCAGACCGCGTCAAGATTAAGAAAGCCTTAAAAGAAATGATTTTCGCTTTTCCTCCTAACCGTTTCCCTCTGGATGAGAAAATGAACATGCAATCAATAGTTGATTACTTTCAAGAAATGTATAGATATACAATCATGCGTCGTCATTTACCTTGCATTCAAGTTGGAAGCGAAAAGAAGACGAACTATTTGCCTATGGAAACAATTCATCAAAATGATATGATTTTAATCCTTATGCAAAGGAGTTTGGTATCAGTGCAGACAACAAGCTTGCATCAGTTGAGGCTGGAGTTGTTCCTGCTCCATGGGTGA | 519 | 0.3892 | MMKVLAIQAMYHLGGYSILLGGYFRERKILQTIQGFQTLPSSAFIEPLPLIDTVAQILGKDVYSKPITDADRVKIKKALKEMIFAFPPNRFPLDEKMNMQSIVDYFQEMYRYTIMRRHLPCIQVGSEKKTNYLPMETIHQNDMILILMQRSLVSVQTTSLHQLRLELFLLHG | 172 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre8g02906 | 172 | Pfam | PAZ domain | 57 | 139 | IPR003100 | GO:0005515 | |
Trre8g02906 | 172 | ProSiteProfiles | PAZ domain profile. | 87 | 136 | IPR003100 | GO:0005515 | |
Trre8g02906 | 172 | CDD | PAZ_argonaute_like | 47 | 136 | - | - | |
Trre8g02906 | 172 | Gene3D | paz domain | 83 | 141 | - | - | |
Trre8g02906 | 172 | SUPERFAMILY | PAZ domain | 42 | 138 | IPR036085 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre8g02906 | Trre-Chr8 | 25207637 | 25210260 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre8g02906 | 39 | 138 | Eukaryotic Initiation Factors Gene Family | AT5G43810 | 49.167 | 3.27e-32 | 119 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre8g02906 | K11593 | - | gmx:100798086 | 132.88 |