Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02906 ATGATGAAGGTGCTAGCAATACAAGCTATGTATCACTTGGGAGGTTACTCTATTCTCTTGGGAGGTTACTTTAGGGAGAGAAAAATTCTGCAAACAATCCAAGGCTTTCAGACTTTGCCATCATCGGCATTTATAGAACCGCTCCCTTTGATTGACACTGTAGCTCAAATTTTAGGAAAAGATGTGTACTCAAAGCCAATTACAGATGCAGACCGCGTCAAGATTAAGAAAGCCTTAAAAGAAATGATTTTCGCTTTTCCTCCTAACCGTTTCCCTCTGGATGAGAAAATGAACATGCAATCAATAGTTGATTACTTTCAAGAAATGTATAGATATACAATCATGCGTCGTCATTTACCTTGCATTCAAGTTGGAAGCGAAAAGAAGACGAACTATTTGCCTATGGAAACAATTCATCAAAATGATATGATTTTAATCCTTATGCAAAGGAGTTTGGTATCAGTGCAGACAACAAGCTTGCATCAGTTGAGGCTGGAGTTGTTCCTGCTCCATGGGTGA 519 0.3892 MMKVLAIQAMYHLGGYSILLGGYFRERKILQTIQGFQTLPSSAFIEPLPLIDTVAQILGKDVYSKPITDADRVKIKKALKEMIFAFPPNRFPLDEKMNMQSIVDYFQEMYRYTIMRRHLPCIQVGSEKKTNYLPMETIHQNDMILILMQRSLVSVQTTSLHQLRLELFLLHG 172
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02906 172 Pfam PAZ domain 57 139 IPR003100 GO:0005515
Trre8g02906 172 ProSiteProfiles PAZ domain profile. 87 136 IPR003100 GO:0005515
Trre8g02906 172 CDD PAZ_argonaute_like 47 136 - -
Trre8g02906 172 Gene3D paz domain 83 141 - -
Trre8g02906 172 SUPERFAMILY PAZ domain 42 138 IPR036085 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre8g02906 Trre-Chr8 25207637 25210260 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02906 39 138 Eukaryotic Initiation Factors Gene Family AT5G43810 49.167 3.27e-32 119
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02906 K11593 - gmx:100798086 132.88