Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02838 ATGGCTTCATCAAGTGGAACATCTTCAGGTTCATCTCTGTTACAAAACTCCGGTTCAGAAGAAGATTTACAGTTGTTGATGGATCAGAAAAAGAGGAAGAGGATGATATCGAACCGCGAATCAGCTCGTCGGTCTCGGATGAGAAAACAGAAGCACTTGGATGATCTTGTTTCTGAAGTTGGTAAATTGAGAAAAGAGAATCAAGAAATACTCACAAGTGTTAATATCACCACTCAACAGTGTTTGAGTGTTGAAGCTGAGAATTCAGTTTTGAAAGCTCAGATGAATGAGTTGAGTAATAGGTTGGAATCTTTGAATGAAATTGTTGGTGTCATGAATTCAAGCAATGGAGTTTTTGGAGCTTCAACTACTTTTGTTGAGCCAAATAATGGTTTCTTCTTCAACTCTTTGAATAATAATATGTCTTATATGAATCAACCTATTATGGCTTCTGCAGACATTTTGCAGCAGTGA 474 0.3713 MASSSGTSSGSSLLQNSGSEEDLQLLMDQKKRKRMISNRESARRSRMRKQKHLDDLVSEVGKLRKENQEILTSVNITTQQCLSVEAENSVLKAQMNELSNRLESLNEIVGVMNSSNGVFGASTTFVEPNNGFFFNSLNNNMSYMNQPIMASADILQQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02838 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Trre8g02838 157 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Trre8g02838 157 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 155 - -
Trre8g02838 157 Pfam bZIP transcription factor 30 81 IPR004827 GO:0003700|GO:0006355
Trre8g02838 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Trre8g02838 157 Gene3D - 28 83 - -
Trre8g02838 157 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Trre8g02838 157 FunFam BZIP transcription factor 28 80 - -
Trre8g02838 157 MobiDBLite consensus disorder prediction 1 50 - -
Trre8g02838 157 MobiDBLite consensus disorder prediction 24 50 - -
Trre8g02838 157 MobiDBLite consensus disorder prediction 1 23 - -
Trre8g02838 157 Coils Coil 81 108 - -
Trre8g02838 157 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02838 Trre-Chr8 24521651 24522124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02838 26 155 bZIP Transcription Factor Family AT4G34590 57.971 5.99e-45 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre8g02838 bZIP_1 2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02838 K25786 - gmx:100101862 201.83