Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02837 ATGAAAAGCATCACATGTTATTTGCTTGCATTCTTCTTCTTATTATTTACACCATCTTCATCATTAACCGATCTTGATGCGTTGCTAAAGCTGAAGAAAACAATGAAAGGAGAGAAAACCAAAGAAGATGTACTCAAAGACTGGAAGTTTTCTACTTCGATTTCAGCTCACTGTTCATTTTCTGGTGTAACATGTGATGAAGAACAACGAGTGATTGCTCTAAACATCACGCAAGTTCCGCTCTTCGGATTTCTTTCGAAGGAGATCGGAGTGTTGGACAAGCTTGAGAGTTTGATCGTTACCATGGACAATCTCACTGGCGAGCTTCCGGTTGAGATTTCCAATCTTACTTCTCTTAAAATCCTCAACATCTCTCACAATACCTTCTCCGGAAACTTCCCCGGTAACATGACACTCGGTATGAAGAAATTGGAGGTTCTGGATGCTTATGACAATAGCTTCGACGGTCCTCTACCGGAGGAAATTGTTAGGCTCGAGAACCTAAAGTTCTTATGTCTTGCTGGGAACTATTTCTCCGGTACTATACCGGAGAGTTACTCGAAGTTTCAAAGGTTGGAGGTTTTAGCCTTAAACACAAACAGTTTATCGGGGAAGATTCCGAAAAGTTTGTCTAATTTAAAGACACTTAAGGTACTACGTCTCGGTTACACCAATGCTTATGAAGGCGGAGTTCCACCAGAGTTTGGTTCGATGAAATATCTCCGATATCTTGAAGTGTCGAACTGTAACCTCACCGGCGAGATTCCACGGAGTCTTGGAAATTTGGAAAACCTTGATAGCTTGTTCTTGCAAATGAACAATCTCACCGGAACAATTCCACCGGAACTCTCTTCCATGAGAAGTCTCATGTCGTTGGATCTCTCCAACAACGAGCTCTCAGGAGAGATTCCTGAGAGCTTCTCAAAACTCAAAAACCTCACTCTCTTGAATTTCTTCCAGAACAAGTTTCGCGGTTCACTTCCAGCGTTCATCGGGGATCTTCCTAATCTCGAAACACTTCAGGTTTGGGAAAACAATTTCTCTTTTGTGTTGCCACAGAACCTCGGTTCAAACGGAAAGTTCATTTACTTTGATGTTACAAAAAACCACCTCACCGGATTGATTCCACCGGATTTGTGCAAATCAAAGCGGTTAAAAACGTTTATTGTTACAGATAACTTCTTTCACGGTCCAATTCCTAAAGGAATTGGCTCGTGTAAGTCATTGTTGACAATCCGAGTAGCTAATAACTTCTTGGACGGGCCGGTCCCTCAAGGAATTTTCCAATTGCCTAATGTTCAGATAATGGAGCTTGGAAATAACCGTTTTAACGGCCAACTACCTTTCGAAGTTTTCGGAGGTTCTCTTGGGACTCTCAAGCTCTCTAATAACTTATTCACTGGGAGGATTCCAGCTTCGATGAAGAATCTCCGATCACTACATTCTCTTTTGCTTGATTCCAATCAATTTGTCGGAGAAATTCCAAAGGAAATATTTGACTTGCCGGCATTGGAAAATTTCAACATAAGTGGCAACAATCTCACCGGTGGTATTCCAACTACGGTCACTCGGTGTAGATCATTGATCACCGTTGACTTTAGTCGGAACATCCTTACCGGTGAGGTTCCAAAGGGGATGAAGAATATGAAGGTTTTAAGCATTTTGAATCTTTCACATAACAATATTTCGGGTCTAATCCCCGATGAGATTCGATTCATGACGAGTCTCACCACGTTGGATCTTTCTTACAACAATTTCACTGGAACTCTCCCCATGGGTGGTCAGTTTTTAGTCTTCAACGACAGGTCATTTTCTGGAAACCCTAACCTCTGCTTCCCACACCAATCTTCATGCATTTCCCTTCTCTACCCTTCGAGAAAAAGTCACACAAAGATCAAGGCCATTGTTATCGCGATTGCTCTCGCAACCGCGGTGTTACTAGTAATTGTGACCATGCACATGATGAGGAAGAGGAAACGCCACATGGCGAAAGCGTGGAAGTTAACGGCGTTTCAAAGGTTAGACTTCAAAGCAGGAGAAGTAGTGGAATGTCTAAAAGAAGAGAACATTATAGGAAAAGGAGGTGCCGGGATCGTGTACCGAGGGTCCATGCCAAATGGAACCGACATCGCGATAAAGCGTTTAGTTGGACAAGGAAATGGTAGAAATGATTATGGTTTCAAAGCTGAGATAGAAACATTGGGAAGAATCAGACACAGAAACATAATGAGACTTTTGGGTTATGTTTCAAATAAGGACACAAATTTGTTGTTGTATGAGTACATGCCTAATGGTAGTTTAGGAGAATGGCTTCATGGTGCAAAAGGTTGTCATTTGAGTTGGGAAATGAGGTATAAAATTGCTGTGGAAGCTGCTAAAGGACTTTGCTATTTGCACCATGATTGTTCTCCTCTTATTATTCATAGGGATGTTAAGTCTAATAATATATTGCTTGATGCTGATTTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGTATGATCCTGGTGCTTCTCAATCCATGTCCTCTATTGCTGGTTCCTACGGCTACATTGCTCCAGAGTATGCATACACACTGAAAGTGGATGAGAAAAGTGATGTGTATAGTTTTGGAGTGGTCCTATTGGAGCTAATTATAGGAAGAAAACCAGTGGGTGAATTTGGAGATGGTGTAGACATCGTTGGATGGATCAATAAAACTGAACTAGAACTTTATCAGCCGTCCGATAAAGCATTAGTATCAGCTATAGTGGACCCGCGTCTCACAGGATACCCATTAACAAGTGTTATCTACATGTTCAACATAGCTATGATGTGTGTTAAAGAAATGGGACCCGCAAGACCTACCATGAGAGAAGTTGTTCATATGCTTACTAATCCACCTCACTCTATCACTCACAATTTAATTAATCTCTAG 2925 0.4154 MKSITCYLLAFFFLLFTPSSSLTDLDALLKLKKTMKGEKTKEDVLKDWKFSTSISAHCSFSGVTCDEEQRVIALNITQVPLFGFLSKEIGVLDKLESLIVTMDNLTGELPVEISNLTSLKILNISHNTFSGNFPGNMTLGMKKLEVLDAYDNSFDGPLPEEIVRLENLKFLCLAGNYFSGTIPESYSKFQRLEVLALNTNSLSGKIPKSLSNLKTLKVLRLGYTNAYEGGVPPEFGSMKYLRYLEVSNCNLTGEIPRSLGNLENLDSLFLQMNNLTGTIPPELSSMRSLMSLDLSNNELSGEIPESFSKLKNLTLLNFFQNKFRGSLPAFIGDLPNLETLQVWENNFSFVLPQNLGSNGKFIYFDVTKNHLTGLIPPDLCKSKRLKTFIVTDNFFHGPIPKGIGSCKSLLTIRVANNFLDGPVPQGIFQLPNVQIMELGNNRFNGQLPFEVFGGSLGTLKLSNNLFTGRIPASMKNLRSLHSLLLDSNQFVGEIPKEIFDLPALENFNISGNNLTGGIPTTVTRCRSLITVDFSRNILTGEVPKGMKNMKVLSILNLSHNNISGLIPDEIRFMTSLTTLDLSYNNFTGTLPMGGQFLVFNDRSFSGNPNLCFPHQSSCISLLYPSRKSHTKIKAIVIAIALATAVLLVIVTMHMMRKRKRHMAKAWKLTAFQRLDFKAGEVVECLKEENIIGKGGAGIVYRGSMPNGTDIAIKRLVGQGNGRNDYGFKAEIETLGRIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGAKGCHLSWEMRYKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWINKTELELYQPSDKALVSAIVDPRLTGYPLTSVIYMFNIAMMCVKEMGPARPTMREVVHMLTNPPHSITHNLINL 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02837 974 Gene3D Phosphorylase Kinase; domain 1 649 761 - -
Trre8g02837 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 226 330 - -
Trre8g02837 974 Gene3D Ribonuclease Inhibitor 226 330 IPR032675 -
Trre8g02837 974 Gene3D Ribonuclease Inhibitor 182 225 IPR032675 -
Trre8g02837 974 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 228 961 - -
Trre8g02837 974 Gene3D Transferase(Phosphotransferase) domain 1 762 970 - -
Trre8g02837 974 Gene3D Ribonuclease Inhibitor 340 621 IPR032675 -
Trre8g02837 974 Pfam Leucine Rich Repeat 241 262 IPR001611 GO:0005515
Trre8g02837 974 FunFam Leucine-rich repeat receptor-like protein kinase 22 184 - -
Trre8g02837 974 SMART serkin_6 685 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02837 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 654 761 - -
Trre8g02837 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Trre8g02837 974 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
Trre8g02837 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 762 973 - -
Trre8g02837 974 Pfam Leucine rich repeat 264 322 IPR001611 GO:0005515
Trre8g02837 974 Pfam Leucine rich repeat 530 586 IPR001611 GO:0005515
Trre8g02837 974 Pfam Leucine rich repeat N-terminal domain 23 66 IPR013210 -
Trre8g02837 974 SUPERFAMILY L domain-like 327 626 - -
Trre8g02837 974 SUPERFAMILY RNI-like 74 420 - -
Trre8g02837 974 SMART LRR_typ_2 262 285 IPR003591 -
Trre8g02837 974 SMART LRR_typ_2 477 501 IPR003591 -
Trre8g02837 974 SMART LRR_typ_2 334 358 IPR003591 -
Trre8g02837 974 SMART LRR_typ_2 430 454 IPR003591 -
Trre8g02837 974 SMART LRR_typ_2 286 309 IPR003591 -
Trre8g02837 974 SMART LRR_typ_2 549 572 IPR003591 -
Trre8g02837 974 SMART LRR_typ_2 573 596 IPR003591 -
Trre8g02837 974 Pfam Protein tyrosine and serine/threonine kinase 686 960 IPR001245 GO:0004672|GO:0006468
Trre8g02837 974 ProSiteProfiles Protein kinase domain profile. 685 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02837 974 SUPERFAMILY Protein kinase-like (PK-like) 681 960 IPR011009 -
Trre8g02837 974 PRINTS Leucine-rich repeat signature 573 586 - -
Trre8g02837 974 PRINTS Leucine-rich repeat signature 289 302 - -
Trre8g02837 974 FunFam LRR receptor-like serine/threonine-protein kinase EFR 331 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02837 Trre-Chr8 24447536 24450904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02837 17 972 Receptor kinase-like Gene Family AT1G75820 61.203 0.0 1197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre8g02837 PK_Tyr_Ser-Thr 8.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02837 K00924 - gmx:732625 1411.36