Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02758 ATGTCGGACGAAGGCGAACCACATCGCCAAATTGTTTTGGGCATCAATGCACCAGGCATTGTTGAGTTTAAAGCTTCGGGTTCAAAGCCTCCTATCATTGAGATCGACACAGGAGCACATTTTCAGACGACTATGGCAAGTGAAAACCGCGATGACTTAATTGAATGGGCTCGTAAGATCGCCGTCAAGTTGAATTTTGGGATCATCATTGGGAAATCTGATTTTGGTAGTGATAGACGGAAGCCGTATTTCAAGTTGGTATGCGAACGAAGCGGAACCTATGTTTCAAAAGGCAAGAAGTTGAAAACGGAAACAACCGGGACGAGGAAATGCCAATGTCCCTTTCGACTCGATGGTTACTTTCATCAAACCAATAGAAAATGGCACATGACTGTTGTCGACGGAACACATAACCACGAGTTGGATAAAGGACTTGAAGGGCATTTGATTGTTGGTCGATTGAAGCGGGAAGAGAAGGAGACTATGGATGAATTGTCTCGGAATTTGGTGGCGCCAAAAAATATACTTGCCACTTTGAAGGAGAGAGATCCGGAGAACAAGACCAACCAAAGACAAATTTACAATGCTCGTTATCATTTGAAAGTTTCTATGCGGGCTTCAATGACTGAAATGCAACACCTATTCAAGATGTTCGCCGAAAAAAATTATTTTTTCAAGACGCGGTCGGTTGATCAAGAATGA 702 0.4302 MSDEGEPHRQIVLGINAPGIVEFKASGSKPPIIEIDTGAHFQTTMASENRDDLIEWARKIAVKLNFGIIIGKSDFGSDRRKPYFKLVCERSGTYVSKGKKLKTETTGTRKCQCPFRLDGYFHQTNRKWHMTVVDGTHNHELDKGLEGHLIVGRLKREEKETMDELSRNLVAPKNILATLKERDPENKTNQRQIYNARYHLKVSMRASMTEMQHLFKMFAEKNYFFKTRSVDQE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02758 233 Pfam Transcription factor AFT 94 141 IPR014842 GO:0000981|GO:0036086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02758 Trre-Chr8 23549483 23550184 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre8g02758 AFT 7.3e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02758 - - tpra:123905216 286.189