Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02755 ATGGGAGATAGTGAAGATGGTAACAATGAAATGCTTCAGAGACTTCATTCTTCTTCTTCTTTTATGAAACAACAACAACAACAACTGAACAATCACATGGAACAATTAAGTATACCTCAGTTTAATTCCTCACAAATGAGAACCGTTGGTAGAAATCAACATCATAATCAAAGGGCAGGTATGCCACCATCACACCCACATCAGATCCCGCCTATTTCACCATACTCTCAGATCCCGGTTTCACGGACGACGCAAATGTCTTCTCATAATACAAGTCCTACACCTTCCCACACTCGATCACTCTCTCAACCGTCTTTTTTCTCTCTCGATTCTCTTCCACCTCTTAGCCCTTGTTCGTTTCGTGAATCTTCAGACACTAACAACAACAACAACAACGCTGACGTGTCAATGGAAGATCGTGACGTCACTTCTCACTCTCCGTTACCTCCGTTTGCTAGAAACCCTTCTTTACCGCCTCGAAAATCGCACCGTCGTTCTAACAGTGATATTCCGTTTGGATTTTCAACTGTTTTGCAGTCTTCTCCGCCGTTGATTCCTCTCAGAGGAAGAGAACTTGGTAAACCTAATTCGTCGGTGGTGAAGAGAGAATTTGAACATAATGTGGAGGAGAAGAAATCTTTATCTCCTGAAGGTGAAGTTGTGGATGATCTTTTTTCTGCTTATATGAATTTGGATAACATTGATGCAATTAATTCGTCTGGGACCGACGACAAAAACGTCGCGGTTGATAATAATCGCGATGATTTGGATAGTAGAGCGAGTGGAACAAAGACGAATGGTGGTGATAGTAGTGATAATGAAGCTGAAAGTAGTGTTAATGAGAGTGGGGATAGTATGCAGAGGAGGGAAGGGATGAAGAGAAGTGCAGGAGGTGATATTGCACCTACTAGTAGACATTATCGGAGTGTGTCGATGGATAGTTTTATTGGGAAGTTGAATTTCAATGATGAGTCATTTAAGCTACCACCTTCACCTGGAGGATTGGTTTCTCCAGGTAATTCGGGTGATGGGAATTCGGCGGCTTTTAGTTTGGAGTTTGGAAATGGTGAGTTTAGTGGACCGGAATTGAAGAAAATTATGGCTAATGAAAAACTTGCTGAGATTGCTATGGCTGATCCGAAGCGTGCTAAGAGGATTTTGGCTAATAGGCAATCGGCTGCGCGATCGAAAGAACGCAAGATGCGTTACATTTCAGAGCTAGAACACAAGGTTCAGACTCTGCAGACCGAAGCTACTACACTTTCTGCACAACTTACTCTGTTGCAGAGAGATTCGGTGGGACTCACTAACCAGAATAGTGAGTTGAAGTTCCGCCTTCAATCCATGGAACAACAGGCAAAACTCCGAGATGCTCTGAATGAGGCGCTTACTGCTGAGGTTCAAAGACTGAAGATAGCTACAGCTGAGCTGAATGGGGAGTCGCATCCTTCTAGCTGCATGATTCCGCAACATTCTGGCAACTCTATGATGTTCCAACAACAGCATCATCCTACTACATCTCAGCAAAACATTCATATTCAACAACATCAACAACAGCAGCAGCATCAGCAACAACAGCAGAATGGTAATGCCAACTCAAAGAATGAGTTAAAGCAGTAG 1620 0.4315 MGDSEDGNNEMLQRLHSSSSFMKQQQQQLNNHMEQLSIPQFNSSQMRTVGRNQHHNQRAGMPPSHPHQIPPISPYSQIPVSRTTQMSSHNTSPTPSHTRSLSQPSFFSLDSLPPLSPCSFRESSDTNNNNNNADVSMEDRDVTSHSPLPPFARNPSLPPRKSHRRSNSDIPFGFSTVLQSSPPLIPLRGRELGKPNSSVVKREFEHNVEEKKSLSPEGEVVDDLFSAYMNLDNIDAINSSGTDDKNVAVDNNRDDLDSRASGTKTNGGDSSDNEAESSVNESGDSMQRREGMKRSAGGDIAPTSRHYRSVSMDSFIGKLNFNDESFKLPPSPGGLVSPGNSGDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIAMADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELNGESHPSSCMIPQHSGNSMMFQQQHHPTTSQQNIHIQQHQQQQQHQQQQQNGNANSKNELKQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02755 539 FunFam probable transcription factor PosF21 380 433 - -
Trre8g02755 539 SUPERFAMILY Leucine zipper domain 381 432 IPR046347 GO:0003700|GO:0006355
Trre8g02755 539 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 84 535 - -
Trre8g02755 539 MobiDBLite consensus disorder prediction 74 137 - -
Trre8g02755 539 Coils Coil 397 431 - -
Trre8g02755 539 MobiDBLite consensus disorder prediction 479 539 - -
Trre8g02755 539 MobiDBLite consensus disorder prediction 261 285 - -
Trre8g02755 539 MobiDBLite consensus disorder prediction 1 196 - -
Trre8g02755 539 MobiDBLite consensus disorder prediction 168 182 - -
Trre8g02755 539 MobiDBLite consensus disorder prediction 11 59 - -
Trre8g02755 539 Pfam bZIP transcription factor 381 435 IPR004827 GO:0003700|GO:0006355
Trre8g02755 539 SMART brlzneu 377 441 IPR004827 GO:0003700|GO:0006355
Trre8g02755 539 MobiDBLite consensus disorder prediction 238 305 - -
Trre8g02755 539 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 379 442 IPR004827 GO:0003700|GO:0006355
Trre8g02755 539 Coils Coil 460 480 - -
Trre8g02755 539 CDD bZIP_plant_RF2 382 431 IPR044759 GO:0003700|GO:0006355
Trre8g02755 539 Gene3D - 380 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02755 Trre-Chr8 23517577 23520424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02755 1 500 bZIP Transcription Factor Family AT4G38900 57.587 1.47e-167 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre8g02755 bZIP_1 5.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02755 - - tpra:123913993 900.582