Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02754 ATGGCCGCACCTCAATCTCTCTCCCTCTCCAAACCCTCCCCTCCCCCTCTCACCACCACCACCCCCCGCTTCTTCTCTAAACCCTCTCTCCCTTCTTTCCTCTCTGACACCCCTCGAAAACCCCTTTTCATCACTTCCTCCAAAAACCCAATTTCCGACATCATCCTCTCCAACAAACCCAAACCATCTCATCAAAACGACGACGTTTTCATCGACGACGATAAGCCTCGTGAAGAGTGTGGCGTTGTTGGAATCTACGGTGACTCAGAAGCTTCACGGTTATGTTACTTAGCTTTACACGCTCTCCAACACCGTGGTCAAGAAGGTGCTGGAATTGTCACTGTTAACAACAACGTTCTTCAATCAATCACCGGCGTTGGTCTCGTTTCCGATGTGTTTAACGAATCAAAGCTCGATCAGTTGCCTGGAAGTTTGGCTATTGGTCATGTTCGTTACTCTACTGCTGGTCAATCCATGCTGAAAAATGTTCAACCTTTTGTTGCTGGGTATCGTTTTGGTTCTGTTGGGGTTGCTCATAACGGTAATTTGGTTAATTATCGTACTTTAAGAGCTGGATTAGAAGAAAAAGGTTCCATTTTTAATACTACTTCTGATACTGAAGTTGTTCTTCATTTGATTGCTACTTCAAAGCATAGACCTTTTATTTTGAGAATTGTTGATGCATGTGAGAAGCTTGAAGGAGCTTATTCGATTGTGTTTGTTACTGAAGATAAACTTGTTGCTGTTAGAGATCCTTTTGGGTTTAGGCCTTTGGTTATGGGTAGGAGAAGTAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCTCTTGATTTGATTGAAGCTACTTATGAGAGGGAAGTTTTCCCTGGTGAGGTTATTGTGGTGGATAATAATGGGATTCAATCACTCTGTCTTATGTCTCATCCGCAGCCGAAGCAGTGTATCTTTGAGCATATTTACTTTGCTTTGCCTAATTCTGTTGTTTTTGGTAGGTCTGTTTATGAATCGCGTAGTCGATTTGGGGAGATACTTGCTACGGAGAGTCCTGTTGATTGTGATGTTGTGATAGCAGTTCCTGATTCTGGTGTTGTGGCTGCACTTGGTTATGCTGCGAAAGCTGGTGTTCCTTTTCAGCAAGGGTTGATTAGGTCACACTATGTAGGAAGGACTTTCATTGAGCCGTCTCAATCAATTAGGGACTTTGGCGTCAAGTTGAAGCTTTCCCCCGTTCGTTCTGTACTTGAAGGTAAAAGGGTTGTTGTTGTTGATGATTCTATCGTGAGGGGAACAACATCATCGAAGATTGTGAGGTTGCTTAAAGAAGCAGGTGCTAAAGAAGTTCACATGAGAATTGCAAGTCCTCCGATTATCGGTTCTTGTTATTATGGTGTTGATACACCTAGCTCAGAGGAGTTGATATCTAATAGGATGAGTGTTGATGAAATAAGGGATTTTATTGGATCAGATTCACTTGCTTTTCTTCCATTTAACAGCTTGCATGATATGTTGGCCGAGGACTCTCCTAATTTTTGTTACGCTTGTTTCTCTGGGAAATACCCTGTCGAGCCAAGAGAGCTTAAGGTTAAGAGGGTTGGCGACTTCATTGATGATGGTTTGAATGGAAGTTTGGAACAAATTGATGGTGGTTGGGTTCAAGCTAACCGAAATACGAAAGAGGTGAATGCTTCTACTGGTCTTTGA 1704 0.4278 MAAPQSLSLSKPSPPPLTTTTPRFFSKPSLPSFLSDTPRKPLFITSSKNPISDIILSNKPKPSHQNDDVFIDDDKPREECGVVGIYGDSEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAGLEEKGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVIVVDNNGIQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRSRFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQSIRDFGVKLKLSPVRSVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVDEIRDFIGSDSLAFLPFNSLHDMLAEDSPNFCYACFSGKYPVEPRELKVKRVGDFIDDGLNGSLEQIDGGWVQANRNTKEVNASTGL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02754 567 CDD PRTases_typeI 342 453 IPR000836 -
Trre8g02754 567 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 80 303 IPR029055 -
Trre8g02754 567 MobiDBLite consensus disorder prediction 1 32 - -
Trre8g02754 567 Gene3D - 339 503 IPR029057 -
Trre8g02754 567 SUPERFAMILY PRTase-like 315 526 IPR029057 -
Trre8g02754 567 CDD GPATase_N 80 330 IPR035584 -
Trre8g02754 567 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 78 527 - -
Trre8g02754 567 Pfam Phosphoribosyl transferase domain 354 449 IPR000836 -
Trre8g02754 567 Hamap Amidophosphoribosyltransferase [purF]. 79 520 IPR005854 GO:0004044|GO:0009113
Trre8g02754 567 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 80 299 IPR017932 -
Trre8g02754 567 Pfam Glutamine amidotransferase domain 158 277 IPR017932 -
Trre8g02754 567 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 80 521 IPR029055 -
Trre8g02754 567 NCBIfam amidophosphoribosyltransferase 80 521 IPR005854 GO:0004044|GO:0009113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02754 Trre-Chr8 23511392 23513095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02754 66 553 PRT Gene Family AT4G34740 85.481 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02754 K00764 - gmx:100801720 936.791