Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02751 ATGTCACCGTCATCATCTTCCACCGGAAACTGCAGCAAAATCCGCCGCATTGTTCGTCTCCGACAAATGCTTCTCCGATGGAGAAAGAAAGCACGAATAACAACAACAGCCTACGATGTACCGGAAGGACACGTGGCAGTATGTGTGGGTCCCAGTATGAGAAGATTCGTTGTTCGTGCTAGTTACTTGAATCATCCGATCTTCAAGAAGCTTCTGATGCAAGCGGAGGAAGAGTACGGTTTTTGTAACCATGGACCGCTTGCGATTCCGTGTGATGAGTCTTTGTTTGAAGAGGTTCTTCGGGTTATGGCCCGACCCGAACCGAAATTTTCTACGCTTGAAGATTTTCAGAGACGGTGCCACGTGGATGTTAGAAGTAGCAGTAGTAGTATTAGTGGTTTTGATCAGTTTGTAGGAGAATCGAGGCCGTTGCTTCATGATGACCCGATTTGTTGA 456 0.4693 MSPSSSSTGNCSKIRRIVRLRQMLLRWRKKARITTTAYDVPEGHVAVCVGPSMRRFVVRASYLNHPIFKKLLMQAEEEYGFCNHGPLAIPCDESLFEEVLRVMARPEPKFSTLEDFQRRCHVDVRSSSSSISGFDQFVGESRPLLHDDPIC 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02751 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 100 IPR003676 GO:0009733
Trre8g02751 151 Pfam Auxin responsive protein 19 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02751 Trre-Chr8 23473909 23474364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02751 9 145 Calmodulin-binding Proteins AT4G34750 50.667 1.19e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02751 K14488 - gmx:100795345 188.734