Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02727 ATGGAGGACGGTGAACTTGATTTCTCGAATCACGAAGTTTTTTCGAGTCCAAACATGGGTGAATTTCCGAGTAGTGGTTCAATGGATAGTTTTTTCGATGAGCTTTTGAAAGATTCGCATGCTTGTACTCACACTCACACGTGTAATCCACCGGGTCCTGATTTTTCACATACTCACACTTGTTATCATGTTCACACTAAAATTGTGCCTGCTGCTGAAGATGATCAGGTTGGTACTGATGATACTGCTGAATCTGAGAAGAAATCGAAGAAACGGCCGGTGGGTAATAAAGAAGCGGTTAGGAAGTATCGTGAGAAGAAGAAAGCTAGGGCTGCGTCGTTGGAAGATGAGGTTATGAAATTGAGGGCTTTGAATCAGCATTTGATGAGGAAGTTGCAGGGACAGGCTGCTTTGGAGGCTGAAGTTGCTAGATTGAAGTGTTTGTTGGTTGATATTAGGGGAAGGATTGAAGGAGAAATTGGATCGTTTCCGTATCAGAAACCGACCAATGTTAACCCTCCGGTTCAGAATTTGACTGGTTCTTATGTGATGAACCCTTGTAATGTGCAGTGTGATGATCGCGTCTATTGTCTTCGTCCTGGAGCAGATGGGACGATTGCTGCAGAAGGGGCCTCACCAAATGAGGGAGGATTTGATGGTTGTGAATTTGAAGGTCTCCAGTGTCTGGCAGGCGAGAATTTTGGGCTCAAGGATCTTAATGGTTGCGGAGTTGGGCCGACAGTGTCTAATGTCAATTCTCAAGCTTCCAATAAAAGAAAAGGGGGTGCTCGTGCAGCCAAAGCAGGGTGA 810 0.4519 MEDGELDFSNHEVFSSPNMGEFPSSGSMDSFFDELLKDSHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPAAEDDQVGTDDTAESEKKSKKRPVGNKEAVRKYREKKKARAASLEDEVMKLRALNQHLMRKLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKPTNVNPPVQNLTGSYVMNPCNVQCDDRVYCLRPGADGTIAAEGASPNEGGFDGCEFEGLQCLAGENFGLKDLNGCGVGPTVSNVNSQASNKRKGGARAAKAG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02727 269 MobiDBLite consensus disorder prediction 81 102 - -
Trre8g02727 269 Pfam Basic region leucine zipper 85 141 IPR004827 GO:0003700|GO:0006355
Trre8g02727 269 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 164 IPR031106 GO:0003700|GO:0006351
Trre8g02727 269 MobiDBLite consensus disorder prediction 1 26 - -
Trre8g02727 269 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 133 IPR004827 GO:0003700|GO:0006355
Trre8g02727 269 MobiDBLite consensus disorder prediction 11 25 - -
Trre8g02727 269 Gene3D - 76 152 - -
Trre8g02727 269 MobiDBLite consensus disorder prediction 72 106 - -
Trre8g02727 269 CDD bZIP 90 143 - -
Trre8g02727 269 SUPERFAMILY Leucine zipper domain 88 134 IPR046347 GO:0003700|GO:0006355
Trre8g02727 269 Coils Coil 97 131 - -
Trre8g02727 269 SMART brlzneu 83 151 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02727 Trre-Chr8 22867228 22868919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02727 1 268 bZIP Transcription Factor Family AT4G35040 63.838 2.31e-116 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre8g02727 bZIP_2 6.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02727 K25785 - gmx:780549 415.616