Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02726 ATGACAGTTGAAAATAGATTTGTTCTTGTTGGGATTAGAATAGATAGCCAAAGTAGACAGCTTCTTAATTGGGCTATTGTTAAACTTGCTCAACCTGGTGATTGTGTTATTGCTGTTCATGTTGTTAAAACTAAAAATTCAGATTATGTTTCCAAAAGTAAGAGCCTTATAGATGGCTATTTAGAGGTTTATGAAGGCTTATGTGATGTGAAGAAGGTTGGTCTTTCTGGTCAAATCTTAACAGGAAAGTCCATTAAAGATATTCTTGTTAGAGAAGCAAAAAACCAGGGTGCTTTGGCTCTAGTGGTAGGGGGTAAATCTGCCACAGCTAAATATTGCGCCAAACGGCTTCCACCCACCATCAATGTTTTGGCCATCCAAGATTCAAGGATTGTCTTTGGAAGGTGCAACAATAAACAACCATCAGGTAGTCTTATATTGGATCCAAGTCCAAGTCTAACAAGCATAGATAACCTGAATGACAGAATAATCCAATCTGAATTTGGTTTTCCCGTGGTCGAGAGTGAGAAATCGCCAGGCCAAAATACCAAGGAATCGAAAGAAGAAACACTTGAGGAATCAGAAAAGAACAAGTCACGGTCAATATCCATGTTTGTAGGCGATCCTTCTGAGCCGAAGCTTGGATGGCCTCTACTCCGTAGAGCGAATTCAGAAATGTTACCAAGCCATCATGGAAGGGACATGTCTGTAGTACAATGGGTAATGACCTTACCAGATCGTTCGCCACAAAGTAGTTCTCAATCATCTTCCAGCGATGAAAATCTATTCGAGAGGAGCATTAGTGAAATTGAGGATGAGAGCTTCAAAAATTATTCACCTTCATCTGTTCTACTACCAAAAGGCCTAGAAGGGATATTAAATATAAATTCACTTAATTGCAAGTGGTTCAGTCTTGAGGCTCTCAAGTCCTGCACTAGCCAATTCTCTTCAGAAAACTTGATCGGGAAAGGCGGGAGCAACCGTGTGTACAAAGGAGTACTCCCTGATGGAAAGCCAATTGCAGTTAAAGTATTGAAGTCATCAAAAGAAGCATGGAAAGATTTTGCCTTTGAAGTGGAAATAATATCCTCATTGAAGCACAAAAACATTACTCAGCTACTTGGAATCTGCATAGAGGACAATACTTTAATATCTGTTTATGATTATTTCCCTAAAGGCAGCTTAGAGGAAAATCTACATGGAAAGAACAAGGATGGATCTCTTTTATCATGGGAAGTGAGATTTAATGTAGCTATTGGAATCGCCGAGGCGCTTGATTACCTACACACAAAAGCTTCAAAGTCTGTTATACATAGAGATATCAAGTCTTCAAACATTCTTCTTTCCAAGGAACTTGAGCCACAATTGTGTGATTTTGGACTTGCAATATGGGGACCAACAACTTCATCATTTTTGACAAAACAAGATGTAGTAGGAACATTTGGTTACCTAGCTCCTGAATATTTCATGTATGGAAAAGTCAGTGATAAGATAGATGTATATGCCTTTGGTGTTGTACTACTTGAACTAATATCAGGTAGGGAACCAATCAGCTCTGAATCTTGCAAAGGACAGGAAAGCTTGGTAGCTTGGGCAAAACCAATAATAGAGAGTGGAAATATCAAAGGTTTGTTAGACCCAAAATTAGAAGGGAAGATTGATGAGACGCAAATGCAAAGAATGGTTTTAGCAGCATCTTTATGTATCACACGAGCTGCTAGACTTCGTCCTAAATTTAATCAGATACTGAAGATCCTAAGAGGGGGTGATGAAATTGAATATTGCTTCAATGAACATTCAGAGAATGAAGAAAACATTGATGATGAAGTGTATCCAAATTCAAGTACAGAGTTACATCTAACTCTTGCATTACTTGGTGTTTATGAGGACAGTACATCATCTTCAAGTAGTACAGACCACAGCTATAGTGAAAACTTGAAAGACCAATGGAGCAGCAGGTCTTCAAGTTTTAATTAA 1977 0.3849 MTVENRFVLVGIRIDSQSRQLLNWAIVKLAQPGDCVIAVHVVKTKNSDYVSKSKSLIDGYLEVYEGLCDVKKVGLSGQILTGKSIKDILVREAKNQGALALVVGGKSATAKYCAKRLPPTINVLAIQDSRIVFGRCNNKQPSGSLILDPSPSLTSIDNLNDRIIQSEFGFPVVESEKSPGQNTKESKEETLEESEKNKSRSISMFVGDPSEPKLGWPLLRRANSEMLPSHHGRDMSVVQWVMTLPDRSPQSSSQSSSSDENLFERSISEIEDESFKNYSPSSVLLPKGLEGILNINSLNCKWFSLEALKSCTSQFSSENLIGKGGSNRVYKGVLPDGKPIAVKVLKSSKEAWKDFAFEVEIISSLKHKNITQLLGICIEDNTLISVYDYFPKGSLEENLHGKNKDGSLLSWEVRFNVAIGIAEALDYLHTKASKSVIHRDIKSSNILLSKELEPQLCDFGLAIWGPTTSSFLTKQDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSESCKGQESLVAWAKPIIESGNIKGLLDPKLEGKIDETQMQRMVLAASLCITRAARLRPKFNQILKILRGGDEIEYCFNEHSENEENIDDEVYPNSSTELHLTLALLGVYEDSTSSSSSTDHSYSENLKDQWSSRSSSFN 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02726 658 FunFam Putative receptor-like serine/threonine-protein kinase 390 603 - -
Trre8g02726 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Trre8g02726 658 MobiDBLite consensus disorder prediction 631 658 - -
Trre8g02726 658 Gene3D Phosphorylase Kinase; domain 1 289 389 - -
Trre8g02726 658 CDD USP_Like 8 118 - -
Trre8g02726 658 MobiDBLite consensus disorder prediction 170 206 - -
Trre8g02726 658 ProSiteProfiles Protein kinase domain profile. 315 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02726 658 Gene3D Transferase(Phosphotransferase) domain 1 390 600 - -
Trre8g02726 658 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 284 389 - -
Trre8g02726 658 SUPERFAMILY Protein kinase-like (PK-like) 296 586 IPR011009 -
Trre8g02726 658 SMART serkin_6 315 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02726 658 PANTHER OS08G0249100 PROTEIN 182 615 IPR046958 -
Trre8g02726 658 MobiDBLite consensus disorder prediction 180 199 - -
Trre8g02726 658 Pfam Protein kinase domain 316 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02726 658 Pfam Universal stress protein family 8 106 IPR006016 -
Trre8g02726 658 CDD STKc_IRAK 321 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02726 Trre-Chr8 22859235 22862851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02726 303 586 Trihelix Transcription Factor Family AT1G70460 44.637 2.82e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Trre8g02726 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02726 - - tpra:123913065 1186.4