Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02721 ATGTTTTATTGTTGGTTTGCCAAGTTATGTGGGTTCTCTGTTCGCAAAGGCCATGTGGTTAAAAATCGCGATGGGAACATTATACAACAAACATTTTTATGTTCATGTGCTGGCTTTAGAGAGGATAGAGGATTAAGTTTGGAGAAACGAAAGCGCGAGGTAAAGAATGAAACAAGATGTGGGTGTGATGCAAGATTTAAATTTCACCTAGACATTGTATCTATGCGATGGTATGTCACTGTACTTGAAATTGATCACAAGCATGACTTACTAGTTGGTACATTGTGTGACTTACTACCAGCACATCGAAAGATGAGTCAAAGTGATATAGATGAAATTGAACGTAACCGGAAAGCGGGGATAAGGCTATACCAAGTCTACGGTTCGGTGGCTAATACATCCGGTGGTTTTCACAAGGTAGGATTTGTTAAAAAAGGATCTGTATAA 447 0.3893 MFYCWFAKLCGFSVRKGHVVKNRDGNIIQQTFLCSCAGFREDRGLSLEKRKREVKNETRCGCDARFKFHLDIVSMRWYVTVLEIDHKHDLLVGTLCDLLPAHRKMSQSDIDEIERNRKAGIRLYQVYGSVANTSGGFHKVGFVKKGSV 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02721 148 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 138 - -
Trre8g02721 148 Pfam FAR1 DNA-binding domain 2 91 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02721 Trre-Chr8 22804375 22804821 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre8g02721 FAR1 5.1e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02721 - - tpra:123884554 192.2