Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02698 ATGGGAATAATCTCCGATACCCCTTCAGTTTCCACCGCCACAAAATGGCTCGGTTTTGTAGCCGCGATTTGGATTCAATCCATCTCCGGCAACAACTACACATTCTCAAACTACTCTGATGCTCTCAAATCTCTTATGCACCTCACCCAATTACAGCTCAACAACCTCTCCGTCGCTAAAGACGTCGGTAAAGCTTTCGGCCTTCTCGCCGGTCTTGCCTCCGACCGTTTACCCACTTGGGCCATTCTCCTCATCGGTTCCTTCGAAGGTCTCATCGGTTATGGTGTTCAATGGCTCGTCGTTGGTCAAATCATTCAACCCCTTCCTTATTGGCAGATGTGTGTGTTTTTGTGCATGGGAGGGAACAGTACAACATGGATGAACACAGCGGTTTTAGTGACATGCATAAGAAACTTCCGGCGAAACAGAGGACCGGTTTCAGGGATTCTTAAAGGCTATGTTGGTTTAAGCACAGCGATATTTACGAATCTTTGTTCTGCTCTTGTAGCAGATGACCCTGCTTTTTTTCTTCTAACACTAGCTCTTGTACCTTTTATCGTTTGTCTCACAGGAGTATTTTTTCTCCGTGAAGTTCCCGTCGCTAAAGTTACCACCGTAGCAGAAGATAACGAAGAAGGGAAGTATTTCGGCATCTGTAATGCCGTCGCCGTTGTTCTCGCCGTTTATCTTTTAGCTTATGGTTTTGTACCAAATGCTAATACACTTGTATCACGTGTTTTCGTTGCGGTTTTGCTTGTTCTGTTGGCGTCACCGTTGGGGATTCCGGTATATGCATATTTCAAGGGAAGAAATTCGGGTCGGGTCGGAGGTGATGTTGAGGGACAACGGGTAACAGAACCGTTGATTCAGAATGGTGAAAAGGAAAGTGAGACGGTTACGGATGCCATGGTGGCGGAGACGGAGGTGGTGGTTGTAAAAGGACAACCGTTGATTGGGGAAGAACATACTATAATGGAAGTAATGAAGAGTTTGGATTTTTGGATCTTGTTTGTTTCGTTTCTATGTGGAGTTGGAACGGGTTTAGCAGTTATGAATAATATGGGTCAAATCGGGTTGGCTCTCGGGTATACGGATGTATCGTTATTTGTTTCGTTAACTAGTATTTGGGGATTTTTTGGAAGGATCGTATCTGGTTCCGTTTCAGAGCATTTCATCAAGAAATCTGCAACGCCGAGACCTCTTTGGAATGCAATATCTCAAATTCTAATGGCTGTGGGCTACATACTTCTAGCCATGGCTATGCCCGGATCACTTTACATCGGTTCTATTATAGTCGGCATATGTTATGGAGTGCGTCTTGCTATTACAGTCCCAACAGCCTCCGAGTTATTTGGACTCAAATATTATGGTCTCATCTACAATATTCTCATCCTCAATCTTCCACTTGGATCTTTCCTCTTTTCCGGGCTACTTGCCGGCATACTATATGATATGGAAGCAACAACAACAGAAGGAGGAGGAAACACATGCGTTGGAGGTCATTGTTACAGGCTAGTGTTTATAGTCATGGCTGGAGCATGTGTTGTTGGGTTCTTCTTAGACATTTTATTGGCTATTAGAACCAAAACTCTCTATAACAAGATTTGCATGAGTAAGAAATCGAAGAAATCCTCCGTGACATCAAGTAGCCAATGA 1656 0.4408 MGIISDTPSVSTATKWLGFVAAIWIQSISGNNYTFSNYSDALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLASDRLPTWAILLIGSFEGLIGYGVQWLVVGQIIQPLPYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTNLCSALVADDPAFFLLTLALVPFIVCLTGVFFLREVPVAKVTTVAEDNEEGKYFGICNAVAVVLAVYLLAYGFVPNANTLVSRVFVAVLLVLLASPLGIPVYAYFKGRNSGRVGGDVEGQRVTEPLIQNGEKESETVTDAMVAETEVVVVKGQPLIGEEHTIMEVMKSLDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYTDVSLFVSLTSIWGFFGRIVSGSVSEHFIKKSATPRPLWNAISQILMAVGYILLAMAMPGSLYIGSIIVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTEGGGNTCVGGHCYRLVFIVMAGACVVGFFLDILLAIRTKTLYNKICMSKKSKKSSVTSSSQ 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02698 551 Gene3D MFS general substrate transporter like domains 327 530 IPR036259 -
Trre8g02698 551 Gene3D MFS general substrate transporter like domains 12 207 IPR036259 -
Trre8g02698 551 Pfam Nodulin-like 15 263 IPR010658 -
Trre8g02698 551 SUPERFAMILY MFS general substrate transporter 33 529 IPR036259 -
Trre8g02698 551 CDD MFS_Mch1p_like 15 517 - -
Trre8g02698 551 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02698 Trre-Chr8 22408990 22412198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02698 13 544 Nodulin-like Gene Family AT4G34950 70.217 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02698 - - gmx:100807372 800.045