Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02684 ATGAAGGATGCAGATGTGTCAAAGCAAATCCAGCAGATGATTAGGTTCATCCGCCAAGAAGCTGAGGAGAAAGCTAATGAAATTTCTGTTTCAGCAGAGGAGGAATTCAACATTGAGAAACTACAATTACTTGAAGCTGAAAAACGGAAGATCAGGCAAGAGTACGAGAAAAAAGCCAAACAGATTGATGTTCGTAGAAAGATTGAATACTCAATGCAGTTGAATGCATCTCGTATAAAGGTACTCCAAGCACAAGATGAGGTGGTAAATTCTATGAAAGATGCTGCTAAAAAGGAACTTTTGAAAATCTCAAATGATAAGAAAGTATACAAGAAACTCATCAAAGATCTTATTGTTCAGGGTCTACTACGCCTGGGGGAACCGTCTGTGTTACTACGATGTAGAGAGGCTGATCGTAAACTAGTTGAGTCATTGCTAGAGGAAGCCAAAAAGGAATATGCTGAGAAAGCTAACGTACAGCCCCCTAAGATTACCATTGATGATCGTGTTTATCTGCCACCACAACCAAAAAATGGCGCTGTGGATTCGCTTGAACCTTTTTGTTCTGGAGGAGTAGTACTAGCCGCAGAGGATGGAAAGATAGTGTTAGAAAATACTCTTGACGCGCGACTTGATGTCATTTTTCGACAGAAGTTGCCTGAGATACGAAAGACTCTGTTAGGTTCAACTTGA 693 0.4055 MKDADVSKQIQQMIRFIRQEAEEKANEISVSAEEEFNIEKLQLLEAEKRKIRQEYEKKAKQIDVRRKIEYSMQLNASRIKVLQAQDEVVNSMKDAAKKELLKISNDKKVYKKLIKDLIVQGLLRLGEPSVLLRCREADRKLVESLLEEAKKEYAEKANVQPPKITIDDRVYLPPQPKNGAVDSLEPFCSGGVVLAAEDGKIVLENTLDARLDVIFRQKLPEIRKTLLGST 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02684 230 Coils Coil 7 27 - -
Trre8g02684 230 Pfam ATP synthase (E/31 kDa) subunit 16 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Trre8g02684 230 Gene3D - 1 62 - -
Trre8g02684 230 Coils Coil 38 61 - -
Trre8g02684 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Trre8g02684 230 SUPERFAMILY V-type ATPase subunit E-like 87 227 - -
Trre8g02684 230 Hamap V-type proton ATPase subunit E [atpE]. 8 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Trre8g02684 230 Gene3D - 92 230 IPR038495 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02684 Trre-Chr8 22141830 22143711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02684 1 229 Primary Pumps ATPases(2) AT3G08560 71.179 4.22e-116 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02684 K02150 - gmx:100791813 380.178