Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02682 ATGGCGGATAGCGTGGTTTCATTCCTTTTAGGACATTTATCCCAATTGCTTCAAAATGAAGCTAACTTACTGTGCGGAGTGGACGACAGAATCATATCCCTCCGCAATGAACTCGAAATCATAAACGTCTACCTCAAAACTTCCTATAAAGGGAACAAGAACAACAACAAAGAAATAGAACAAATTGTTATGAGTCAAATCAGAGATGTCGCCCACCTAGCCAAGGATGTCATCGACACATTTATGGTCAATGTTGCCATCTACAAGAGGAGAAACGTGATGGGAAGAATGCTTCACAGCTTTGATCATGCAAAGTTGCTTCGTGACGTTGCAGAGAAAATTGATAAGATCAAAACCACACTCAAAGAGATACGTGAAAACAACATCAACTACAATCAAGAAAGCAGTAATCAATCAACATCAGCAACAGAAGAGGAAGAGAGGAAACGATCACTGCAAAGATTAAGAAGAAATGTGGAGGAGGAAAATGTAGTGGGATTTGTCCATGAATCTAAAGTAGTTATCAATAGACTCATAGAGGGTGATTCTCGGCGTCTCGATGTCCTTTCAGTCATTGGTATGGGTGGACTGGGCAAAACAACTCTTGCACGAATGGTCTACAATAGTGACGAGGTCAAGAAGCACTTCAACTGTCGTGCGTGGATTTACGTTTCGAATGAGTGTAGAACTAGGGAACTTTTGCTTGCCCTTCTTCAAAATTTGATGCTAAACCATGATTATGAAGGTAGCAGCAGCAACAAAATCAAAAAGAAGGGTAAGAAGAAACACAAGGAAGCTGTGAATAATTGTCAAGACATCTCTAGCTTAAGTGATGATGAGCTTAAGAAAAGATTGTGGGAATACTTGGAGTGCAAAAAGTATTTGCTGGTTCTTGATGACTTGTGGAAAATACAAGATTGGGATGAGGTAAAGGATGCTTTTCCCAATGGAAACAGAGGAAGCAGAATACTGATAACTAGTCGTTTGAAAGATGTTGCTTCGCATACCAGTCAAGATCCTCCTTACCTCCTTCAATTTCTCAATGAAGAACAAAGTTGGGAGCTCTTCTCCAAAAAAGTGTTTAGAGGAGGAGAAGAGTACTCTTGTGATCTTGAATTTGTTGGTAAACAAATCGTTAAAAGTTGTAGAGGTTTGCCACTATCAATTGTGGTGCTAGCAGGACTACTAGCAAACAAAGAAAAGTCACATAGAGAATGGTCCAAAGTGTTGGGTCATGTTAACTGGTATCTTACTCGAGATGAGACTCAAGTCAAGGATGTTGTACTTAAACTCAGTTTCGACGACTTGCCTTCAAGATTAAAACCTTGTTTTCTGTATCTAGGGATATTCCCCGAAGATTCCGAAATACGTGTAAGACAATTGTTGCAGCTATGGGTCGCTGAAGGATTTATTCAAGAAACCGGTAGCAGAGATGCATATGATGTTGCTGAAGACTACTTGTATGAGCTCATTGATCGTAGTTTGGTCCAAGTAGCACGAGTTAAGATCAATGGAGGTGTGAAAATATGTCAAATTCACGATCTTCTCAGAGATCTCTGCATATTAAAGAGCCAAGAGGACAAAATCTTTGAAATTTGTACAGATACCAATATTTTAATCCCGACAAAACCTCGTAGATTATTTGTCCATTCTACAATGTCTCACTTTGTTTCCTCAAGCACCAAAGACCATTCATGTGTACGATCTTTGTTTTGCTCTGATCCAAACCTCTTTGTTGCTAGCGAAGAGTGGAAATTGCTTACCAAAGGCTTCAAATTGGTTCGGGTATTGAATCTTGAGGGAAGGCATTTTTCCAAAATTCCTTCCAATCTGGGGAACTTTATTCATTTGAGGAGCTTAAGAATAGACTCAAACTTCATCCAAAGCGTTCCAGATTCTATATGCAACCTTCAGAATCTACAAACACTAGACATTGGACCTTCAACTGTGCCATTCAGAATCCACAAACACTACCCGATTTCATTTCCATATGAAATATCAAAGCTCAAGCATCTAAGACATGTGTATACTTATAGGCCTATAAAGCTACGTTTCAATAGTTCCAAATCAGATGGTGAAGTTATGTGGCACCTTCAAACAATCGGTTTCATTGCACTTGATGAAAAAACAACATATCTCATAGAGAAAGCAAGCTTCCCTAAACTAAAAACATTACGTTTGCATATCTCCTCAGACTTCAAAGGTGATGCACCCAAAATGTTGCTAAGCTTACAACAATTGAAGCAATTGAATAAGCTAGCAATTGATACGGAATGGAAAGCCAATTATAAGCTATTGGAAGTATTTCAAAGTCTGAAGCACATAACGCATATGAAAATACTAAAAATTATAATCAATGACCTCGAGCTTGTAACCTCTGCACCAATGTTTCCTCCCAACATTACCAAGTTAACATTGTCACATATTAAGTGCTTGAATGATGTAGGTATGAAAGTTATTGGAAGTCTCACCAAACTCCAGGTTTTGATCTTAATTGGAAATGAAAGGAGTGCAGGTACGTATTTGGTTCTTAATTGTGTTGAAGATGGGTTCCCACAATTAAAAGAGTTTCAGATGAAAACTTTGAGTGTTCGAAACTGGAAATTAGCCAATGGTTCCATGCCACGCCTTCAAACCCTCGTTATTGACACTTGTTATCACTTGGATAGCCTCCCAAGTGAATTGTGGTCTTTGACTACCTTAAGAAAAGTACATGTTCGTAAACCCTCTAATGCAATAGCTAGGTTGTTACAAAATTTGGAAGTTAATAATAGATGTGAGCTCATTGTAGAATAA 2796 0.3852 MADSVVSFLLGHLSQLLQNEANLLCGVDDRIISLRNELEIINVYLKTSYKGNKNNNKEIEQIVMSQIRDVAHLAKDVIDTFMVNVAIYKRRNVMGRMLHSFDHAKLLRDVAEKIDKIKTTLKEIRENNINYNQESSNQSTSATEEEERKRSLQRLRRNVEEENVVGFVHESKVVINRLIEGDSRRLDVLSVIGMGGLGKTTLARMVYNSDEVKKHFNCRAWIYVSNECRTRELLLALLQNLMLNHDYEGSSSNKIKKKGKKKHKEAVNNCQDISSLSDDELKKRLWEYLECKKYLLVLDDLWKIQDWDEVKDAFPNGNRGSRILITSRLKDVASHTSQDPPYLLQFLNEEQSWELFSKKVFRGGEEYSCDLEFVGKQIVKSCRGLPLSIVVLAGLLANKEKSHREWSKVLGHVNWYLTRDETQVKDVVLKLSFDDLPSRLKPCFLYLGIFPEDSEIRVRQLLQLWVAEGFIQETGSRDAYDVAEDYLYELIDRSLVQVARVKINGGVKICQIHDLLRDLCILKSQEDKIFEICTDTNILIPTKPRRLFVHSTMSHFVSSSTKDHSCVRSLFCSDPNLFVASEEWKLLTKGFKLVRVLNLEGRHFSKIPSNLGNFIHLRSLRIDSNFIQSVPDSICNLQNLQTLDIGPSTVPFRIHKHYPISFPYEISKLKHLRHVYTYRPIKLRFNSSKSDGEVMWHLQTIGFIALDEKTTYLIEKASFPKLKTLRLHISSDFKGDAPKMLLSLQQLKQLNKLAIDTEWKANYKLLEVFQSLKHITHMKILKIIINDLELVTSAPMFPPNITKLTLSHIKCLNDVGMKVIGSLTKLQVLILIGNERSAGTYLVLNCVEDGFPQLKEFQMKTLSVRNWKLANGSMPRLQTLVIDTCYHLDSLPSELWSLTTLRKVHVRKPSNAIARLLQNLEVNNRCELIVE 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02682 931 CDD RX-CC_like 2 126 IPR038005 -
Trre8g02682 931 Gene3D - 154 340 IPR027417 -
Trre8g02682 931 FunFam Probable disease resistance protein At1g61300 146 341 - -
Trre8g02682 931 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 447 IPR027417 -
Trre8g02682 931 Gene3D Ribonuclease Inhibitor 686 926 IPR032675 -
Trre8g02682 931 Gene3D - 346 432 IPR042197 -
Trre8g02682 931 Gene3D - 433 523 IPR036388 -
Trre8g02682 931 FunFam Probable disease resistance protein At1g63360 433 522 - -
Trre8g02682 931 Coils Coil 107 134 - -
Trre8g02682 931 PRINTS Disease resistance protein signature 188 203 - -
Trre8g02682 931 PRINTS Disease resistance protein signature 872 888 - -
Trre8g02682 931 PRINTS Disease resistance protein signature 382 396 - -
Trre8g02682 931 Gene3D - 5 105 - -
Trre8g02682 931 FunFam Probable disease resistance protein At5g66910 346 433 - -
Trre8g02682 931 Pfam NB-ARC domain 173 431 IPR002182 GO:0043531
Trre8g02682 931 Gene3D Ribonuclease Inhibitor 524 685 IPR032675 -
Trre8g02682 931 SUPERFAMILY L domain-like 512 907 - -
Trre8g02682 931 MobiDBLite consensus disorder prediction 128 149 - -
Trre8g02682 931 PANTHER DISEASE RESISTANCE PROTEIN RP 64 859 IPR044974 GO:0006952
Trre8g02682 931 Coils Coil 142 162 - -
Trre8g02682 931 Pfam Rx N-terminal domain 5 86 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02682 Trre-Chr8 22123039 22125834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02682 175 519 WRKY Transcription Factor Family AT5G45050 23.343 7.71e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02682 - - mtr:25492796 1353.58