Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02674 ATGGCGGCTACTGTATCTGCTTGGTCCAAACCAGGTGCATGGGCACTTGATTCTGAGGAACACGAAGCTGAACTCCTTCAAAACAACAACAACAACAACAACCACAACCACAACAACAACGTTGTTGAATCCAAACCACTCGCTGAATTCCCTTCTCTCGCTGTTGCCGCCGCAACAAAACCCAAAAAGAAGAAAGCCCAAACCCTATCTTTGGCCGAATTCACTGCCAAACCTGTTTCTTCTTTTACTCATCAAGATCCGGTTGATCTTCCCACCGGTCCACGTCAGCGAACCGCTGAGGAAGTCGAACGTGACCGGACTCGTATTGGTGGAGGATTTGGATCTTACGGTGGTGGCCGTCCTAATCGCAATTCCGAGAGTGATGAATCTTCTGTTTCAAGATGGGGTTCTTCTAGGGTTCCCAGAAACGATTCGTTTGGTTCTAGGGATAGGGATTCCAATCGTGACTCTCAACCTTCTAGGGCTGATGAAATTGATAATTGGGCTGCTGCTAAGAAACCTTCCTTTGGGAATGGGTCTGATAGAAGGGATAGAGTTGAAAGAGGTGGTTTTTTCGATTCGCAGTCGCGGGCTGATGAATCTGATAGCTGGGTTACTAATAAGAATTTTGTGCCAACTGAGGGACGGAGATTCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATAGAGAGAGGAGAGTAGGTTTTGGTACTAGTGGTGGTGCTGATTCGGATAATTGGAATAAGAAGAAAGTTGGTGAATTTAGTGTTGCAAGTGAAAGAACTGAGAATGTTGTTGTTGGTGGAAGGCCAAGGCTTGTTTTGCAACCGCGTACTGCGCCACCGAGTAATGAAAATCAGGATGTTCCTACTGCTGCTGCTGTTGTAGCAAAGCCTAAGGGTGCAAATCCTTTTGGCGAGGCTAGGCCAAGGGAGCAGGTTTTGGCTGAGAAAGGACAGGATTGGAAGAAGATTGATGAGCAACTTGAGAGCACGAAGATTAAGGAGACAGCGGTTGTTGAAGGATTTGGAAAGAGGGGTTTTGGTTCTGGTAATGGACGCGGTGAAGATCGATCTGAGAGGAGTTGGAGGAAATCAACTCCATCTGATGATGGTCGTTCAGAAAGTGCTGAGAAAGTGGAGGATGAACACATTGAAGAAAACTAA 1167 0.4713 MAATVSAWSKPGAWALDSEEHEAELLQNNNNNNNHNHNNNVVESKPLAEFPSLAVAAATKPKKKKAQTLSLAEFTAKPVSSFTHQDPVDLPTGPRQRTAEEVERDRTRIGGGFGSYGGGRPNRNSESDESSVSRWGSSRVPRNDSFGSRDRDSNRDSQPSRADEIDNWAAAKKPSFGNGSDRRDRVERGGFFDSQSRADESDSWVTNKNFVPTEGRRFGGGGGGGGGGDRERRVGFGTSGGADSDNWNKKKVGEFSVASERTENVVVGGRPRLVLQPRTAPPSNENQDVPTAAAVVAKPKGANPFGEARPREQVLAEKGQDWKKIDEQLESTKIKETAVVEGFGKRGFGSGNGRGEDRSERSWRKSTPSDDGRSESAEKVEDEHIEEN 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02674 388 MobiDBLite consensus disorder prediction 268 289 - -
Trre8g02674 388 MobiDBLite consensus disorder prediction 196 210 - -
Trre8g02674 388 MobiDBLite consensus disorder prediction 351 388 - -
Trre8g02674 388 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 375 IPR010433 GO:0003743
Trre8g02674 388 MobiDBLite consensus disorder prediction 177 195 - -
Trre8g02674 388 Pfam Plant specific eukaryotic initiation factor 4B 7 334 IPR010433 GO:0003743
Trre8g02674 388 MobiDBLite consensus disorder prediction 339 388 - -
Trre8g02674 388 MobiDBLite consensus disorder prediction 120 143 - -
Trre8g02674 388 Coils Coil 16 36 - -
Trre8g02674 388 MobiDBLite consensus disorder prediction 144 168 - -
Trre8g02674 388 MobiDBLite consensus disorder prediction 74 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02674 Trre-Chr8 22052909 22054826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02674 1 366 Eukaryotic Initiation Factors Gene Family AT4G38710 50.630 5.38e-71 228