Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02668 ATGGAGAAATTCTCATTCTCCTTTATCATTTTCACAACATTTCTACTTTGTTTCTTCTTCTCTTCTCAACAAGCTAGATCACAAAGTGATAATGATGATGATGATTCACAACCACTTCTTGCACTCAAAACATCCATAGACATTCATAACAAACTTCCATGGCCAGAAAAAAACGACGACGTTTGCACTTGGGAAGGAGTTAAGGATTGTTTCAAAGGAAGAGTTAGAAAGCTAGTACTCGAATATTTCAACTTAACAGGAACATTAGATTCAAAAATCTTGAACCGTTTGGATCAACTTCGAGTTCTTAGTTTCAAAGGAAATTCACTTTCTGGTCAAATCCCTAATCTCTCGAATCTCGTCAATTTGAAATCTATTTATCTTAATGATAATAACTTCTCTGGCGAGTTTCCGGCTTCTGTTTCGGTTCTTCACCGTGTTAAAGTTATTGTTCTGTCTGGTAATAGAATCTCCGGCGAGATTCCGGCGTCGTTGCTCAAGCTTCCTCGGCTCTATGTTCTCTACTTGCAAGATAACTTGTTTACTGGTTCGATTCCTGGTTTTAATCAAACCGGACTTAAGTACTTGAATGTCTCGAATAATAAACTCTCCGGCGAGATTCCGGTGACGAATGCATTGAACCGGTTCAATGCGTCGTCGTTTTCTGGGAACTTAGAGCTATGCGGAGAAAAGATCCACAAAAAATGCAGAAGTAGCAATCTGTTTCCGCCGCAGTTGGCGCCGTCGCCGTCGGTCGGTTCCGTTGGAGGGAAAACGAAAACGACGTCGTCGAAATCGAACCGTACGAAACTGATAAAGATAATTGGAGGGAGTGTTAGCGGGTTTGTTTTGTTGCTAATTTGCTTAATGATACTTGTGTGGGTAATTCGCAAGAACCGTAGGAAAAGGGTGGGATCCTCTGCAGCGAGGAGAGGGAAAAGTGCTGACGTGGCAGCAGGAGAAGGTGAAAATGATGGAGGAGGAGGAGGAGAGGGTAGAGGAAGTAATTATGAAGCAAAACAAGGAGGATTTGCTTGGGAAAATGAGGGTATAGGGAAATTGGTGTTCTGCGGAGCAGGGGATCGAGAAATGGGTTATAGTTTAGAGGATTTACTTAAGGCTTCTGCTGAGACATTAGGGAGGGGTATTATGGGAAGTACATATAAGGCAGTGATGGAATCAGGTTTTATTGTTACGGTTAAGAGGTTGAAAGATGCTAGGTACCCTGGTTTAGAGGAGTTTAGGACACATATAGACTTACTTGGAAAGCTTAGACATCCTAATTTGGTCCCACTTAGGGCTTACTTTCAAGCTAAAGAAGAACGTCTTCTAGCCTATGACTATTTTCCCAATGGAAGCCTATTCTCTCTTATTCATGGATCAAAAACATCTAGCGGTGGAAAACCTCTTCACTGGACATCATGTCTTAAAATTGCAGAAGATCTAGCAACAGGCCTTCTCTATATCCACCAAAACCCCGGCATGACTCACGGAAACCTGAAATCTTCTAATGTGTTACTTGGTTCCGACTTCGAGTCCTGTCTCACCGATTACGGTCTCACCGTGTTCCTCAATCCCGACACAATGGAAGAACCAAGTGCCACTTCTTTTTTCTATAGAGCTCCCGAATGCCGCAGTTTTCAGCGGCCACAAACTCAACCTGCCGATGTATACAGCTTTGGTGTCCTTCTCCTAGAGCTTTTGACGGGAAAAACACCCTACCAAGACCTTGTTCAGACACACGGTTCAGATATACCTAAATGGGTTCGGTCAGTGCGTGAAGAAGAAACCGAATCTGGTGACGATCCTGCCTCGTCAGGCAATGAAGCGTCTGAAGAGAAGCTTCAGGCTCTATTGAACATTGCAATGGCATGTGTTTCAGTTATGCCGGAGAATAGGCCTACAATGAGAGAAGTTCTAAAGATGATAAGAGATTCAAGAGGGGAAGCTCATGTCTCATCTAATAATAGTAGTGATCATTCACCTGGTAGATGGTCAGATACAGTTCAAAGTTTGCCAAGGGATGAACATCTTAGCATATAA 2043 0.4283 MEKFSFSFIIFTTFLLCFFFSSQQARSQSDNDDDDSQPLLALKTSIDIHNKLPWPEKNDDVCTWEGVKDCFKGRVRKLVLEYFNLTGTLDSKILNRLDQLRVLSFKGNSLSGQIPNLSNLVNLKSIYLNDNNFSGEFPASVSVLHRVKVIVLSGNRISGEIPASLLKLPRLYVLYLQDNLFTGSIPGFNQTGLKYLNVSNNKLSGEIPVTNALNRFNASSFSGNLELCGEKIHKKCRSSNLFPPQLAPSPSVGSVGGKTKTTSSKSNRTKLIKIIGGSVSGFVLLLICLMILVWVIRKNRRKRVGSSAARRGKSADVAAGEGENDGGGGGEGRGSNYEAKQGGFAWENEGIGKLVFCGAGDREMGYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPGLEEFRTHIDLLGKLRHPNLVPLRAYFQAKEERLLAYDYFPNGSLFSLIHGSKTSSGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDTMEEPSATSFFYRAPECRSFQRPQTQPADVYSFGVLLLELLTGKTPYQDLVQTHGSDIPKWVRSVREEETESGDDPASSGNEASEEKLQALLNIAMACVSVMPENRPTMREVLKMIRDSRGEAHVSSNNSSDHSPGRWSDTVQSLPRDEHLSI 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02668 680 MobiDBLite consensus disorder prediction 242 263 - -
Trre8g02668 680 SUPERFAMILY L domain-like 53 228 - -
Trre8g02668 680 Gene3D Ribonuclease Inhibitor 34 189 IPR032675 -
Trre8g02668 680 MobiDBLite consensus disorder prediction 241 263 - -
Trre8g02668 680 SUPERFAMILY Protein kinase-like (PK-like) 377 651 IPR011009 -
Trre8g02668 680 MobiDBLite consensus disorder prediction 588 611 - -
Trre8g02668 680 FunFam Nuclear pore complex protein NUP107 32 187 - -
Trre8g02668 680 Gene3D Ribonuclease Inhibitor 190 240 IPR032675 -
Trre8g02668 680 MobiDBLite consensus disorder prediction 647 680 - -
Trre8g02668 680 Gene3D Transferase(Phosphotransferase) domain 1 449 667 - -
Trre8g02668 680 ProSiteProfiles Protein kinase domain profile. 373 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02668 680 MobiDBLite consensus disorder prediction 305 334 - -
Trre8g02668 680 Gene3D Phosphorylase Kinase; domain 1 359 448 - -
Trre8g02668 680 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 648 IPR046959 -
Trre8g02668 680 MobiDBLite consensus disorder prediction 649 680 - -
Trre8g02668 680 Pfam Protein kinase domain 376 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02668 Trre-Chr8 21999723 22004268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02668 14 680 Receptor kinase-like Gene Family AT1G60630 60.979 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre8g02668 Pkinase 6.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02668 - - lja:Lj3g3v3500180.1 1025