Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02655 ATGCAAGAGCTGCAACAACATCATCATCATCATCAACAGCAGCAGCAGCAGCAGCAAAATCCCTCTGCACTGTTGCCACAACTCACCGCCAATCATCAATCCTCAACTACCGTCACTTCTCTTAGGTCACCATCTTCAACCTCCGCCGCCGCTCAATCCCACCGTCAATCCTTACTTCCTGCGCCGGTCGTGGCTGTTCTCCCGTCCGGGGAGCCGGTTTCGACGGCGCCGCTGAATTTTCAGTTGGCGAGAGTTCGGCTGTCGGACATTGGTCCTTATGACGGTGCACCGGCGGGGACTTATGTTAGGGCAATGGAAACACTGTGTTCTTCTCTGTTGAAGTACAATGCGGCTTTGATTGAATTAGGGAGTGAAGATACTGCTCTTATGCGATGTGGATTGGAAGGTGCTAGATTGTTCTTTAGGAGTAGAGCACATCTCGGTGTTGGAAAGGGAAGCCGTGGGGTTTACATGTATAGGGCAGGAAGAGCTTTGGAGGATTGGGATTTGTCTCCTCCTTGCATGGCTGATATTTTTAGGTGCATGGGGAAGGCTTCTCGTGTTGCTTTGTCTGCCATTGCAAGGCATCTGCGCCTCAGAAGCGATGTTTTCAACCAACTGCTTGATGATGCTCCATTGCCTGCTAACGAGGTGTCTTCTTCTGTTCTTGTTGGGACCTACTCGCATGCTTCTTTACAAAATGGAAAAGGTGCCATCGGAGGCGGTAAGCCTACCATCAATGGTGAAGTTGAGAAGGGGTTGTTGACCTTGATATCTTCTGACACTCCTGGTCTTCAGGTATGTGACCCCAATGGCCGCTGGTATCTGGCAGACAGTGGGTCTGGGCCTGGAGATCTTTTACTGATAACAGGCCGGGCGCTTAGCCATGCTACTGCAGGCCTACATCCAGCCGCATCATATAGAGCTTCTCCAGATTGTTTTATGAGTCCTAATAGTGGAGGAAGGACTTCACTTGCATATAGACTCATGCCACAGGGCAATGCTATATTAGATTGTTCTCCAATTGCAGCAGCTGGTCATGTTATTACTCAAAGCTATGTTCCAATATCTGTAAGCCAATTTATGGATGACCTTGCTGCTGAAGAACTGTTAGGCAGCAGATGTGATAATAATGACGTTGCACAAAGCAATGCGAACAAGGACCCGTCATTAAGAAGTGTTCTATCAGATCCTTTGTCTGGCTCATTTCTGGAAGATGCAATGCTTGTCTCATGTGGACATTCTTTTGGTGGTCTCACACTGAGGAGAGTCATTGAAACATCAAGATGCACCCTCTGCAATGTTGATATTGAAACCGGCTCTCTGATCCCTAATCTTGCTCTTAGAGCTGCAGCTGCTGCTGTCAAGCATGAGGATGATCGGAGGTTATTTCGTAATGCTGCTCTTCGAAAGCGGAGGAAAGAAATGGGTGAACCAATGGATCCAATCAGAAGAATGAACAGGGAAAATGGAGATTTTACTTCTGCTGATGGACTCCAGCGGGGAGTACAATATCCATTTTCAGTAAATGAGAAAGTTATTATCAAGGGTAACAGGAGAACACCCGAAAAATTTGTTGGGAAAGAAGCTGTCATTACGTCTCAATGCCTCAATGGCTGGTATTTGCTCAAGATTATTGGATCTGGAGAGAATGTCCGCCTGCAGTATCGTTCTCTCAGGAAGCTCTTAAACACACCAACAATGGAGGACCAGTGTCAGGTGCAGCCAGTTCAAAATAGCAGCTCTTAG 1749 0.474 MQELQQHHHHHQQQQQQQQNPSALLPQLTANHQSSTTVTSLRSPSSTSAAAQSHRQSLLPAPVVAVLPSGEPVSTAPLNFQLARVRLSDIGPYDGAPAGTYVRAMETLCSSLLKYNAALIELGSEDTALMRCGLEGARLFFRSRAHLGVGKGSRGVYMYRAGRALEDWDLSPPCMADIFRCMGKASRVALSAIARHLRLRSDVFNQLLDDAPLPANEVSSSVLVGTYSHASLQNGKGAIGGGKPTINGEVEKGLLTLISSDTPGLQVCDPNGRWYLADSGSGPGDLLLITGRALSHATAGLHPAASYRASPDCFMSPNSGGRTSLAYRLMPQGNAILDCSPIAAAGHVITQSYVPISVSQFMDDLAAEELLGSRCDNNDVAQSNANKDPSLRSVLSDPLSGSFLEDAMLVSCGHSFGGLTLRRVIETSRCTLCNVDIETGSLIPNLALRAAAAAVKHEDDRRLFRNAALRKRRKEMGEPMDPIRRMNRENGDFTSADGLQRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGSGENVRLQYRSLRKLLNTPTMEDQCQVQPVQNSSS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02655 582 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 81 573 - -
Trre8g02655 582 MobiDBLite consensus disorder prediction 1 54 - -
Trre8g02655 582 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 389 459 IPR013083 -
Trre8g02655 582 Gene3D - 164 370 IPR027443 -
Trre8g02655 582 SUPERFAMILY Clavaminate synthase-like 174 341 - -
Trre8g02655 582 SUPERFAMILY RING/U-box 391 457 - -
Trre8g02655 582 MobiDBLite consensus disorder prediction 11 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02655 Trre-Chr8 21877046 21889776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02655 391 569 Plant U-box Gene Family AT5G05230 39.459 3.32e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02655 - - adu:107477161 906.746