Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02618 ATGTCGCGCCAGTCGACGGGTTCCGCTTTCACCAAATCCAAGACCCTCGACAATAAATATATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCAATTAAACAAGTTTCTTTGGAAAATATTGCCCAGGAGGATCTCAACATCATCATGCAAGAGATTGATTTGTTAAAGAATTTGAACCACAAAAACATTGTAAAATATCTTGGATCTTTGAAAACCAAGAGTCACTTGCACATAGTTCTTGAGTATGTGGAGAACGGCTCACTTGCAAATATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCAGTTTATATTGCCCAGGTGTTGGAAGGCTTGGTTTACCTACACGAGCAAGGTGTTATCCATCGGGATATTAAGGGTGCAAATATATTGACAACTAAAGAGGGTCTTGTCAAACTTGCTGATTTTGGTGTTGCAACAAAATTAACAGAGGCAGATGTTAATACTCATTCAGTTGTTGGAACACCATACTGGATGGCGCCAGAGGTTATAGAAATGTCTGGAGTTTGTGCAGCTTCCGACATTTGGAGTGTTGGCTGTACAGTTATTGAGCTTCTTACATGTGTGCCTCCTTACTATGATTTGCAGCCTATGCCAGCTCTTTTCCGTATTGTCCAGGATGAGCATCCTCCAATTCCTGATAGCCTTTCGCCTGACATTACTGATTTTCTGCATCAATGCTTTAAGAAGGATGCTAGACAAAGGCCTGATGCTAAAACGCTGTTGTCTCACCCCTGGATTCAAAACTGTAGGCGTGCCCTGCAGTCTTCTCTTCGTCATAGTGGAACACTAAGAAATATAGAGGAAGGTGATTCTGCAGATGGAAAAGTTTCTAATGGTGATCATAAGCTTGCAGGTGAAAACTCTTCTGTGGAGAAAGAGGGCACTGCGGCTGCTGATAGCAGCAGATCTCAAGATGAAAGTGCTTCAGATTCTAATTTTCCCAACGAAAGAACAGAAAAGGCAGATGATGTCCCATCGGATGAGGTTCCTACCTTATCCATTCATGAGAAGTCCTTTCACCAAACTGGTTCTAGCAAACCCTCTTCTGATGGAGAAATGGGTAGCTCTGAGCCAACTGGTAATCACGAAATTTCAAATGCTAACGACCTTCATGAAGACACGATGAATGGAGAAGTTGGATCACCACAGTCAAGAGGAATGGCTAATAAGGTTGGAGGAAAAGACAGTTCTATGAATAATGGCAAAAAATCATTTGCTTTTGGAGCAAGAGGTCTTGATAAAGGTCCCACAAAGGCAATGAAGATACTGCACCCTGCGGAAGGAAATGAGCTGAGTAAATTTAGTGACCCTCCCGGAGATGCCTACTTGGATGATTTATTTCCGTTAGACAAACGGCCTAGGGAGGTTGTTGGTGAGGCATCCACATCTACATCCACTTCACATGTGGCAAAAGGCAATGCATCTATGACTGATGGAGGGGAAAAGGACCTGGCCAAAGAGTTGAGGGCTACAATTGCACGAAAGCAATGGGAGAAAGAGAGTGAAATTGGACAAGCAAACAATGGTGGAAATCTTTTACACCGAGTGATGATAGGTGTTCTAAAAGATGATGTGATTGATATAGATGGTTTGGTATTTGATGATAAACTTCCTGGAGAGAACCTTTTTCCTCTGCAGGCTGTTGAGTTCAGCAAATTAGTTGGTTCGTTAAGACCGGAGGAATCAGAAGACGTGATTGTCTCTTCATGTCAGAAACTCATTGGTATATTTCAGCAGCGCTCAGAGCAGAAGATTGTTTTTGTTACCCAGCATGGTTTACTTCCTCTATCCGACTTGCTAGAAGTTCCTAAAACACGTGTCATATGTTCTGTGCTTCAGCTTATAAATCAAATAATTAAAGACAACACTGATTTTCAAGAAAATGCCTGTCTAGTTGGATTGATTCCTGCAGTCATGAGCTTTGCTGTACCTGATCGTCCCCGGGAGATACGTATGGAAGCAGCTTATTTCTTACAGCAGCTTTGTCAATCAAGTTCTTTGACGTTACAAATGTTTATAGCTTGCCGTGGAATACCTGTTTTGGTGGGATTTCTTGAAGCTGATTATGCCAAGTACAGGGAAATGGTTCATCTTGCTATTGATGGCATGTGGCAGGTATTTAAGCTTCAGCAATCAACACCTAGAAATGATTTTTGTCGGATAGCTGCAAAAAACGGCATACTGCTTAGGCTTATAAATACACTTTATAGCTTAAATGAGTCAACGCGCTTAGCATCTATGTCTGTTGGGGGCGGGTTTTTAGTTGATGGTTCGACTCAGCGGCCACGTTCTGGTATCTTGGACCCTACACATCCTTTTTTTGGTCAGAATGAGGCACTGCTCTCTTCAGCAGATCAGCAAGATCTTCCTAAATCAAGACGTGGAGTACTTGATAATAACTTAGAGCCTTCACATTCATTATCCTCCAATCCTCGAAGATCAGATGCTAACTACCAAATGGATGTTGATAGACCTCAATCAAGCAATGCTGCAGCTGAAGCTGTGCCACTAGAGAAGAGTTTGAATCTTGCATCCAGGGAATCTTCAGCGGGTGCATTCAAAGAGAGAGAGAGTGTGGATCGTTGGAAAAGTGATCCTTCTCGAACTGATGTGGAACTCAGACAGCAACGTCTTAGTATTTCTGCCAACAGAACATCAACAGACAGGCCTTCAAAATTGACAGAAACTTCCTCGAACGGGTTATCAGTAACAGGAGCTACTCAGCAAGAGCAAGTTAGGCCTCTTCTGAGCTTGTTGGACAAAGAGCCCCCATCTGGACGTTTCTCTGGACAGCTTGAATATGTACGTCAGTTTTCAGCATTAGAAAGACATGAAAGTGTACTCCCTTTGCTACATGCCTCTGATAAGAAAACAAATGGTGAACTAGACTTTTTGATGGCAGAATTTGCAGATGTTTCTCAACGTGGAAGGGAAAACGGAAATCTTGACTCCGGTGCTAGAGTGTCTCAAAGAGTCACTCCCAAGAAGTTGGGGACTTTTGGTTCTAGTGAAGGAGCTGCTTCCACATCTGGGATCGTATCTCAGACAGCTTCAGGTGTATTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCTAATTCATCTGGACTACTTTCCCACATGGTTTCGTCATTGAATGCAGAAGTTGCGAAAGAGTACCTCGAAAAGGTAGCAGATCTTCTGCTTGAATTTGCACAAGCTGACACAACAGTGAAGTCTTATATGTGTAGCCAAAGCTTGCTCAGTCGGCTGTTCCAGATGTTTAATAGGGTAGAACCACCTATTTTATTGAAGATACTGAAGTGTATTAATCACCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAGGCAATAAAATACTTGATACCAAACCTTGAACTCAAAGAAGGGTCTCTTGTATCAGAGATACATCATGAGGTCCTGAACGCACTGTTCAACTTATGCAAGATAAATAAGAGGAGACAGGAACAAGCAGCTGAAAATGGAATCATTCCCCATCTGATGCAATTCATCACATCCAATTCTCCCCTGAAACAATATGCATTGCCTCTGTTGTGTGACATGGCTCATGCATCTCGTAACTCAAGGGAGCAATTAAGGGCTCATGGTGGTTTGGATGTCTATTTGAACCTTCTTGAGGATGAATTTTGGTCTGTGACAGCACTAGATTCAATTGCTGTTTGCTTAGCCCATGACAATGATAATAGGAAGGTTGAACAAGCATTGCTGAAAAAGGATGCAGTTCAGAAGCTTGTGAAGTTCTTCCAGTGCTGTCCAGAGCAGCATTTTGTACACATATTGGAGCCGTTCTTGAAAATCATAACAAAATCTGCCCGGATCAATACCACTTTGGCTGTTAATGGATTAACGCCATTACTCATTGCGAAGCTTGATCATCAAGATGCTATAGCCCGTCTTAATTTGCTCAGGCTAATAAAGTCTGTTTATGAGCATCACCCTCAGCCCAAGAAACTGATTGTGGAAAACGATCTACCGGAAAAACTTCAAAACTTAATAGGGGAACGCAGAGATGGGCAAGTGTTGGTTAAACAGATGGCAACTTCATTACTTAAAGCACTACACATAAACACTGTTTTGTAA 4203 0.4221 MSRQSTGSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKSHLHIVLEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLHQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTLRNIEEGDSADGKVSNGDHKLAGENSSVEKEGTAAADSSRSQDESASDSNFPNERTEKADDVPSDEVPTLSIHEKSFHQTGSSKPSSDGEMGSSEPTGNHEISNANDLHEDTMNGEVGSPQSRGMANKVGGKDSSMNNGKKSFAFGARGLDKGPTKAMKILHPAEGNELSKFSDPPGDAYLDDLFPLDKRPREVVGEASTSTSTSHVAKGNASMTDGGEKDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDDKLPGENLFPLQAVEFSKLVGSLRPEESEDVIVSSCQKLIGIFQQRSEQKIVFVTQHGLLPLSDLLEVPKTRVICSVLQLINQIIKDNTDFQENACLVGLIPAVMSFAVPDRPREIRMEAAYFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASMSVGGGFLVDGSTQRPRSGILDPTHPFFGQNEALLSSADQQDLPKSRRGVLDNNLEPSHSLSSNPRRSDANYQMDVDRPQSSNAAAEAVPLEKSLNLASRESSAGAFKERESVDRWKSDPSRTDVELRQQRLSISANRTSTDRPSKLTETSSNGLSVTGATQQEQVRPLLSLLDKEPPSGRFSGQLEYVRQFSALERHESVLPLLHASDKKTNGELDFLMAEFADVSQRGRENGNLDSGARVSQRVTPKKLGTFGSSEGAASTSGIVSQTASGVLSGSGVLNARPGSANSSGLLSHMVSSLNAEVAKEYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDEFWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIAKLDHQDAIARLNLLRLIKSVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02618 1400 MobiDBLite consensus disorder prediction 291 429 - -
Trre8g02618 1400 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Trre8g02618 1400 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Trre8g02618 1400 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Trre8g02618 1400 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Trre8g02618 1400 SUPERFAMILY ARM repeat 1065 1393 IPR016024 -
Trre8g02618 1400 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02618 1400 MobiDBLite consensus disorder prediction 901 937 - -
Trre8g02618 1400 CDD STKc_Cdc7_like 19 274 - -
Trre8g02618 1400 FunFam MAP3K epsilon protein kinase 1 17 306 - -
Trre8g02618 1400 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Trre8g02618 1400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Trre8g02618 1400 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02618 1400 Gene3D - 570 788 IPR011989 -
Trre8g02618 1400 MobiDBLite consensus disorder prediction 340 362 - -
Trre8g02618 1400 MobiDBLite consensus disorder prediction 878 900 - -
Trre8g02618 1400 MobiDBLite consensus disorder prediction 291 316 - -
Trre8g02618 1400 MobiDBLite consensus disorder prediction 827 854 - -
Trre8g02618 1400 SUPERFAMILY ARM repeat 579 774 IPR016024 -
Trre8g02618 1400 Gene3D Transferase(Phosphotransferase) domain 1 17 307 - -
Trre8g02618 1400 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g02618 1400 SMART arm_5 608 648 IPR000225 GO:0005515
Trre8g02618 1400 SMART arm_5 1185 1224 IPR000225 GO:0005515
Trre8g02618 1400 SMART arm_5 1139 1183 IPR000225 GO:0005515
Trre8g02618 1400 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Trre8g02618 1400 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 722 - -
Trre8g02618 1400 MobiDBLite consensus disorder prediction 810 937 - -
Trre8g02618 1400 MobiDBLite consensus disorder prediction 363 393 - -
Trre8g02618 1400 FunFam MAP3K epsilon protein kinase 1-like 1054 1395 - -
Trre8g02618 1400 MobiDBLite consensus disorder prediction 321 339 - -
Trre8g02618 1400 MobiDBLite consensus disorder prediction 486 510 - -
Trre8g02618 1400 MobiDBLite consensus disorder prediction 486 501 - -
Trre8g02618 1400 FunFam MAP3K epsilon protein kinase 1 572 786 - -
Trre8g02618 1400 Gene3D - 1056 1397 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02618 Trre-Chr8 21464150 21482498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02618 1 1400 MAP Kinase Kinase Kinase AT3G13530 71.719 0.0 1989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Trre8g02618 Pkinase 4.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02618 - - gmx:100813256 2425.97