Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02610 ATGGCTAATAGAATTATCACTAGTTTTGTTGTCACATTGGTGATACTAGCCACAACAAGTGATGCACAATTGTCATCTACGTTTTATGATAGTACATGTCCCAATGCACTAAGCACTATTAGAACTGCGATTCGTACTGCAGTTTCTAAAGAGCGTCGTATGGCTGCATCTCTTATCCGCCTTCATTTTCATGATTGTTTTGTCCAGGGGTGTGATGCATCAATTTTGTTGGATGATAGTTCCACAATCGATAGCGAAAAGAGTGCACTACCAAATGTTAACTCTGTAAGGGGATTTGAAATCATTGATAAAGCAAAATCTGAGGTGGAGAAAGTATGTCCTGGAGTTGTGTCTTGTGCAGACATAGTAGCTATAGCAGCACGTGATGCTTCATTTGCAGTTGGTGGTCCATCATGGACAGTGAAACTTGGACGAAGAGATTCTACCACAGCAAGCAAAAGTTTGGCCAATTCAGACCTTCCATTATTTACAGACGATCTTACAACTCTTATATCTCATTTTACAAACAAAGGTCTCACTGTGAGGGACATGGTTACTCTATCTGGTGCGCATACAATCGGACAAGCTCAATGTTTCACATTTCGTGGCAGGATATACAACAATGCAAGTGACATAGATGCTGGATTTGCTAGCACTCGCCAACGTGGTTGTCCATCTTTGAGTACCACTGCAAACAATCAAAAGTTAGCAGCATTGGACTTGGTCACACCCAATTCTTTTGATAACAACTACTTCAAGAATTTAATTCAGAAGAAGGGTTTATTGCAATCAGATCAAATTTTATTCAGTGGAGGATCTACAGATTCTATCGTTTCAGAATACAGCAAAAATCCTACAACTTTTAAATCTGACTTTGCCGCAGCTATGATAAAGATGGGAGATATTAAACCCTTAACAGGATCAATCGGAATTATAAGAAGCATTTGCAGCGCTGCCAACTAA 963 0.3956 MANRIITSFVVTLVILATTSDAQLSSTFYDSTCPNALSTIRTAIRTAVSKERRMAASLIRLHFHDCFVQGCDASILLDDSSTIDSEKSALPNVNSVRGFEIIDKAKSEVEKVCPGVVSCADIVAIAARDASFAVGGPSWTVKLGRRDSTTASKSLANSDLPLFTDDLTTLISHFTNKGLTVRDMVTLSGAHTIGQAQCFTFRGRIYNNASDIDAGFASTRQRGCPSLSTTANNQKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQILFSGGSTDSIVSEYSKNPTTFKSDFAAAMIKMGDIKPLTGSIGIIRSICSAAN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02610 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Trre8g02610 320 Gene3D - 27 320 - -
Trre8g02610 320 Gene3D Peroxidase, domain 2 161 299 - -
Trre8g02610 320 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Trre8g02610 320 FunFam Peroxidase 27 169 - -
Trre8g02610 320 Pfam Peroxidase 41 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 FunFam Peroxidase 161 299 - -
Trre8g02610 320 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601|GO:0042744
Trre8g02610 320 SUPERFAMILY Heme-dependent peroxidases 23 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 ProSiteProfiles Plant heme peroxidase family profile. 23 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g02610 320 PANTHER PEROXIDASE 72-RELATED 20 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02610 Trre-Chr8 21399769 21401096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02610 9 320 Peroxidase AT1G14550 68.471 1.90e-159 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02610 K00430 - gmx:100786161 528.865