Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02594 ATGACCAAACAAACCAATCTCAACCTCACCTCCTCCTCCTCGGCTTTCGCGGCCACAAACTTCAACTTTAACATGATATATTCCCTTGGTCTCTACCTCTTAGAAGATATCCAAATTCTTGAAATTCTTATTGCAATTACCATCTTCATAATCATTCATTCTCTTAGGCAAAAAAACCATCATGGCTTACCTATTTGGCCTTTTCTCGGCATGTTACCGTCTTTAATCACCGGTCTAAGGACTAACTTGTATGAATGGATCACCGACATTCTTAACAAACAAAACGGGACCTTTCGATTCAAAGGTCCTAGTTTTAGCAGCCTCAACTGCATAGTCACTTCTGATCCTCGAAACCTCGAACATCTTCTCAAAACCAAATTCATTAACTTCCCTAAAGGAACTTACTTTAGAAACATGGTTAGAGACTTACTTGGAAATGGTATATTCAATGCAGACGACGAAATATGGCAGAAACAAAGAAAAACAGCGAGTATCGAATTTCATTCAACAAAGTTCAGAAATTTAACAACTGATTCTTTATTTCAGCTTGTTCATTCAAGGCTTTTACCTGTTTTAGATGAATCAGTTGATAAAAAAATTGTCATTGATCTTCAAGACATTCTTTTAAGGTTAACTTTTGATAATGTTTGTATGATAGCTTTTGGTGTTGATCCTGGTTGTTTGAGTCAAAAACTTCCCGAGATACCGTTCGCGAAAGCCTTTGAAGATGCAACAGAAGCGACCGTGCTTCGTTTCGTTATGCCTACATGTGTTTGGAAGTTCATGAGGCTTCTTAACTTAGGCACAGAAAGAAAACTCAAGAAATCAATTAAAGGGGTTGATGAGTTTGCTGAGAATGTCATAAAGACTAGAAAAAAAGAACTGTCTTTGGAATTTGAGGAAAAGAAACAAAGATCTGATTTGTTAACTGTTTTTATGAAGATGAAAGATGAGAATGGAAGTGCTTATTCAGATAAGTTCTTGAGGGATATATGTGTGAATTTTATATTGGCTGGTAGAGACACTTCTTCTGTGGCTTTGAGTTGGTTTTTTTGGTTGCTTGATAAGAATCATGAAGTGGAGGAGAAGATATTAGAAGAGATATGCAGAGTGGTGAATCAGAGGAATGATATGAAGAATGAAGAGTTTGGAAATTCATTGATTTTTAGACCTGAAGAGATTAAAAAAATGGATTATTTGCATGCTTGTTTATCTGAAACTCTCAGATTATACCCTTCTGTTCCTGTTGATCACAAGGAGGTAGTTGAGGATGATACATTCCCAGATGGAACAGAACTAAAAAAAGGTACAAAAGTGGTGTATGCAATTTATGCAATGGGAAGAATGGAAAGTATATGGGGAAAAGATTGTAGAGAATTTAAGCCAGAAAGATGGTTAAAAGATGGACATTTCATGAGTGAATCTGCATACAAATTTACTGCATTTAATGGTGGACCAAGGTTATGCTTAGGCAAAGATTTTGCATATTATCAAATGAAATATGTTGCTGCTAGTATCATATATAGATACCATGTTAAGGTTGTTGAGAATCATCCTGTGGAGCCAAAGATTGCATTAACTATGTACATGAAGCATGGAATTAAAGTTAATCTTTATAAGAGGGATGATGCAGAAATTCAAAAATGA 1647 0.3558 MTKQTNLNLTSSSSAFAATNFNFNMIYSLGLYLLEDIQILEILIAITIFIIIHSLRQKNHHGLPIWPFLGMLPSLITGLRTNLYEWITDILNKQNGTFRFKGPSFSSLNCIVTSDPRNLEHLLKTKFINFPKGTYFRNMVRDLLGNGIFNADDEIWQKQRKTASIEFHSTKFRNLTTDSLFQLVHSRLLPVLDESVDKKIVIDLQDILLRLTFDNVCMIAFGVDPGCLSQKLPEIPFAKAFEDATEATVLRFVMPTCVWKFMRLLNLGTERKLKKSIKGVDEFAENVIKTRKKELSLEFEEKKQRSDLLTVFMKMKDENGSAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDKNHEVEEKILEEICRVVNQRNDMKNEEFGNSLIFRPEEIKKMDYLHACLSETLRLYPSVPVDHKEVVEDDTFPDGTELKKGTKVVYAIYAMGRMESIWGKDCREFKPERWLKDGHFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIYRYHVKVVENHPVEPKIALTMYMKHGIKVNLYKRDDAEIQK 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02594 548 PANTHER CYTOCHROME P450 52 535 - -
Trre8g02594 548 FunFam Cytochrome P450 54 544 - -
Trre8g02594 548 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 PRINTS E-class P450 group I signature 401 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 PRINTS E-class P450 group I signature 479 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 PRINTS E-class P450 group I signature 489 512 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 Gene3D Cytochrome P450 50 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 PRINTS P450 superfamily signature 480 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 PRINTS P450 superfamily signature 489 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 SUPERFAMILY Cytochrome P450 62 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 Pfam Cytochrome P450 63 526 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre8g02594 548 CDD CYP86A 98 533 - -
Trre8g02594 548 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 482 491 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02594 Trre-Chr8 21289116 21291369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02594 1 548 Cytochrome P450 AT5G23190 71.403 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02594 K15402 - gmx:100809503 872.848