Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g02532 ATGGTTAGTGCAATTAGGTTAATAGAAATGGCGAAAAAGTGGCAAAAAATGGCGGCTCAAAAACGCAAGAGGATCTCTTACCTAAGAAATGAAGCGGATATGAAATCTTCATCGGTAAATAAGGGTCACTTTGTTGTTTACAGCATCGACCATAAGAGGTTTGTGGTTCCTCTAAAGTATCTTAGCACAAACGTGTTTAGAGAACTTTTTAAATGGTCTGAGGAAGTGTTCGGATTACCAACAACTGGACCTATTATGTTACCGTGCGATAGTGTTTTCTTGGACTATGCAATCTCTTTAGTTCAAGAACAAATTCCTGAAGATGTGGAGAAGGCTTTGATCACTTTCATGTATGCTTGTCAAAACGAAGCATCTTCCTTTCATGATCTTAGGCAAAATAATGAACACATAATTATCTATGGTTTTTGA 429 0.3706 MVSAIRLIEMAKKWQKMAAQKRKRISYLRNEADMKSSSVNKGHFVVYSIDHKRFVVPLKYLSTNVFRELFKWSEEVFGLPTTGPIMLPCDSVFLDYAISLVQEQIPEDVEKALITFMYACQNEASSFHDLRQNNEHIIIYGF 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g02532 142 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 133 IPR003676 GO:0009733
Trre8g02532 142 Pfam Auxin responsive protein 12 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g02532 Trre-Chr8 20890629 20891057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g02532 3 101 Calmodulin-binding Proteins AT4G34750 31.000 6.27e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g02532 - - ccaj:109798531 192.971